TCONS_00016825-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016825-protein
Unique NameTCONS_00016825-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016825-protein ID=TCONS_00016825-protein|Name=TCONS_00016825-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
HHCGRNATLALVREKYWILKGKSKVRKVLNRCFVCRRETIKTKHPMMAAL
PKERLSVGSHAFENVGVDYFGPINVKQGRRTRRTAGTAKRYGALFTYMTT
RALHLELAGDLSTDSFILALRRFRARRGNPKTIRSDNGTNFVGAEREIRE
ALAKWDQKRIQDELSQYD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009422XLOC_009422Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016825TCONS_00016825Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015416Znf_H2C2_histone_UAS-bd
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015416Zinc finger, H2C2-type, histone UAS bindingPFAMPF09337zf-H2C2coord: 2..35
e-value: 1.5E-5
score: 25.0
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 53..161
e-value: 3.7E-15
score: 55.5
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 56..150

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016825-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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