TCONS_00016809-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00016809-protein
Unique Name	TCONS_00016809-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1261

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00016809-protein ID=TCONS_00016809-protein|Name=TCONS_00016809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1261bp
MPRFKLLYRPFLPAVFFNYVFLFYFCYRNKLCKNELKIFEKQHTMEVIEP
LERENTKLSDIVDEVWTKPKAVSDLAKLWKYKREKRIKDLYLERINQKRK
RDFASEKEINQLVARKIPFEYLAQDWFEEKKVNTDSRAYLLENLIPTLIM
GVEKLLLEAEKRKLVEMAELTPDFNPINFLAQFLMRNNPKYSNFVEASPY
AKTIRNMLNSLKERAFDMNESNRIARMRAEAKKRKEEFEKQQQLIALLRR
GRPDAIQEMFVLWTGDRSAVISLSLVQSSIRSFEDYIVMLPADIQKDSRD
ALKIVEIDITGKLINIREFVEYIMKRASKLGSAAFNKLMEHMSDLAKEYR
KSVSLENIRNIFSNLFTAVDFSDSGYLDRQRILSLLCMYYDSLKHDPVQF
SLKDPRMWPVSELSEEEDEVAQYNEKLRSRDYTDAQSTINEEDEGERSDN
TDVETSSNAESETSLGKYMSTTNTKAKSGGGGVGESDNESTRSDGTNKTN
KPKLDDIQENEVVDNFTSSDERSDEENEKREAEIRDIMYSRSSSGTEPEA
IFGVSRPFSATQAKPFNKERMSQDQFVNLLINFVGEDPMNSAVENLVRFL
RNGYVETEEERNERLEKTRHKATEIRRKIQIDQLFELWDIDASGFLETDE
VEMVLARWREEEISDHVNREACHTFEETFSKISRGMFKRLIEDVCSKFKD
DDVFDRLIQFITKSVQRSFEEQKRGEFRKRWLNNIDFSARTSGAMVDPVF
KTVFSVIEHDSFRHGKEKKICAYVAFLEPNESKLTNVKGTHILRYIACTT
SDNDYVLNRVLHRGMRCIAFNATDTGKPIHVPRVINHGGVHLWNPNRRDD
KIEGSFICLPLKDHEKVVLGMLGIDTMADPHEKAIFVTHEISFYQGVAKA
LSQAIQFIDMRQKTIKISESAVSWILRRSPHVHEVILYLVEPALKVTEGS
VLRKMATLSHNSITKPDIPPRLERRDNLFRDYLFKCVDTSETLTADAYGE
RHFAFPLRDAEGMVVSIVDISIGKLRTLPPHELKEIHRMLKLLEMAQKEM
TMEVAGENKTIVLEVEKEHQNMRIDVLFDRIMLQDLRANVGRLDARAFAE
IKSYKDPPKIIHDILKAVLILYFQSKAEKEEENNNYEHTLDPIAEEQQME
RLEEWTAAKQFVNSDLVKWITDFDPTAGSGTTKGGEKLSQLLGDIMPGAV
TKHGSLPAQYMFNWAFVCLSLIEHTNKMKLIRNKRATGGGPTGHTPNENI
EEVGGAGLDGE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009407	XLOC_009407	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00016809	TCONS_00016809	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR029016	GAF_dom-like
IPR011992	EF-hand-dom_pair

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 221..244
None	No IPR available	COILS	Coil	Coil	coord: 605..625
None	No IPR available	GENE3D	1.10.238.10		coord: 355..714 e-value: 4.9E-8 score: 32.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..550
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1234..1261
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 639..651
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 626..661 score: 9.269
IPR029016	GAF domain-like	SUPERFAMILY	55781	GAF domain-like	coord: 793..913
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 625..666 coord: 355..402

Blast

[Close]

BLAST of TCONS_00016809-protein vs. Swiss-Prot (Human)
Match: EFCB5 (EF-hand calcium-binding domain-containing protein 5 OS=Homo sapiens GN=EFCAB5 PE=1 SV=3)

HSP 1 Score: 386.726 bits (992), Expect = 9.049e-113
Identity = 231/693 (33.33%), Postives = 366/693 (52.81%), Query Frame = 0

Query:  566 FNKERMSQDQFVNLLINFVGEDPMNSAVENLVRFLRNGYVETEEERNERLEKTRHKATEIRRKIQIDQLFELWDIDASGFLETDEVEMVLARWRE-------EEISDHVNREACHTFEETFSKISRGMFKRLIEDVCSKFK--DDDVFDRLIQFITKSVQRSFEEQKRGEFRKRWLNNIDFSARTSGAMVDPVFKTVFSVIEHDSFRHGKEKKICAYVAFLEPNESKLTNVKGTHILRYIACTTSDNDYVLNRVLHRGMRCIAFNATDTGKPIHVPRVINHGGVHLWNPNRRDDKIEGSFICLPLKDHEKVVLGMLGIDTMADPHEKAIFVTHEISFYQGVAKALSQAIQFIDMRQKTIKISESAVSWILRRSPHVHEVILYLVEPALKVTEGSVLRKMATLSHNSITK-PDIPPRLERRDNLFRDYLFKCVDTSETLTADAYGERHFAFPLRDAEGMVVSIVDISIGKLRTLPPHELKEIHRMLKLLEMAQKEMTMEVAGE-NKTIVLEVEKEHQNMRIDVLFDRIMLQDLRANVGRLDARAFAEIKSY-------KDPP------------KIIHDILKAVLILYFQSKAEKEEENNNYEHTLDPIAEEQQMERLEEWTAAKQFVNSDLVKWITDFDPTAGSGTTKGGEKLSQLLGDIMPGAVTKHGSLPAQYMFNWAFVCLSLIEHTNKM 1228
            FN    +  QFV LL  FVGED   S  E L  F + GYVETE+E+   LE+    A ++R+++ ++ +F+ WD D SGFL+  EV+ +L  ++E       ++   H+     H   E   ++S   F+  IE V S+ +  +D V + +++F+  +++RS  E  R   R++WL+ I  +A TSG  ++PV+   F  +  D+  HG  KKI A+++ L   E+ L   KG  +LR +ACT  D  +VLNRVL+R M+ I+F   D GKPIHVP+V  HG +  WN +R      GSF+ LPL+D    + G+L +DT+ DPHE  IF+ HEI FYQGVA   S A  ++  R+  + I  + + W+   +  +  +  Y VEP+       VLR M       +T+    PP + R+  +FRD+LFKC D+SE + A A GE H   PLR+  G  + ++D +IG+ R L   E K++ +M+K++++A  E+  E +GE  K  +LE+E   +  R  +LF RIML +L+ ++  L++  F  +  Y        + P            K++ DILKAV IL+F  + E   +                      W   K +VN  LV  I  FDPTA        + + + + D     V K G++  +++++W  +C +L++ T ++
Sbjct:  809 FNGVSFNLLQFVQLLETFVGEDAPLSVSETLTSFFKEGYVETEQEKMNALEQFSQNAFQVRQRLLLEAIFQKWDSDGSGFLDLKEVDELLYTYKEGMEKESMKKAKLHIQFPKPHPGHEV--RLSSKQFQNYIELVVSELRGNEDQVLESVVEFLMNALERSHIESLRNSARRKWLHQIQCAAETSGVSLEPVYSETFKALMQDAEAHGN-KKISAHISLL--EENLLLPEKGNVLLRNVACTLDDAQFVLNRVLYRDMKGISFTVVDEGKPIHVPQVQYHGNIFFWNQSRNKHDYNGSFLALPLQDAYMRIFGVLAVDTLRDPHEINIFLPHEIRFYQGVANVFSTAYHYVHSREHILHIVITGIGWLYDVTSSITSITTYFVEPSPAQDSDYVLRNMMVTGQLGLTEIHKNPPTIHRKSCIFRDFLFKCTDSSEVVLASACGETHIVVPLRERTGEALGVLDFNIGQNRMLLCQEYKDLQKMMKVVQVACYEILGEFSGEIKKKYILEIENVREVQRAGILFFRIMLLELQESIQLLNSMEFVSLLLYDHTLVTEPNSPQDSKSMELEANVKLVRDILKAV-ILFFHPELEFSSD-------------------FGSWDKCKFYVNKYLVNNICAFDPTA-KHVEVNVQLIDEYIRDHSRTEVWKFGNVVIEHLYHWIHICSALMKITKQL 1475

HSP 2 Score: 161.384 bits (407), Expect = 8.587e-40
Identity = 95/301 (31.56%), Postives = 159/301 (52.82%), Query Frame = 0

Query:  118 PFEYLAQDWFEEKKVNTDSRAYLLENLIPTLIMGVEKLLLEAEKRKLVEMAELTPDFNPINFLAQFLMRNNPKYSNFVEASPYAKTIRNMLNSLKERAFDMNESNRIARMRAEAKKRKEEFEKQQQLIALLRRGRPDAIQEMFVLWTGDRSAVISLSLVQSSIRSFEDYIVMLPADIQKDSRDALKIVEIDITGKL---INIREFVEYIMKRASKLGSAAFNKLMEHMSDLAKEYRKSVSLENIRNIFSNLFTAVDFSDSGYLDRQRILSLLCMYYDSLKHDPVQFSLKDPRMWPVSELSE 415
            P + LA++WF    +  ++ AYLL+ L+PTL+ GVE +L + EK+K++  A+    F+PIN+L ++L+RNNP Y      S Y + ++ +   LK    D    NR+++M+   K+ +++ E   ++I  +   R  A+QE F  W  D   +I  S++Q+ ++ F             D +      ++DIT      +N  EF EYI      L S  F +L++H+   A E+R+ +  +  R +F+ LF   D    G+LDRQR L+LL ++YD      ++  L++PR WP  E  E
Sbjct:  152 PRDNLAKEWFNTDSMTLNNTAYLLDKLLPTLVPGVENMLTQVEKKKVLTEADTPSKFDPINYLGEYLIRNNPNYIKDPGMSGYQRLMKEVTEDLKIYVPD-TICNRVSKMKENVKQNRKQRESIDKIIVKVANTRKQALQEQFDEWILDPKGMIPKSVIQNVLQEFFQ---------NPDFKLGSHCKQLDITDSTEPRLNKMEFTEYISSHIKDLKSEMFEELLKHLCHSADEFREVIKADMRRQMFAELFLHCDHGKVGFLDRQRTLALLELFYDH-SSQMLRSLLRNPRQWPFIEFEE 441

The following BLAST results are available for this feature:

BLAST of TCONS_00016809-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00016809-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EFCB5	9.049e-113	33.33	EF-hand calcium-binding domain-containing protein ...	[more]

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TCONS_00016809-protein (polypeptide) - C. hemisphaerica