TCONS_00016580-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00016580-protein
Unique Name	TCONS_00016580-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	415

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00016580-protein ID=TCONS_00016580-protein|Name=TCONS_00016580-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
RKLINKINYNKYKMVAWWNGVVLFMWLAYRITCYEGFDPTGGVSDEKKLK
LEDKYKVEDCKYRTQEHDIIHWHYKGMLLNGKNFGEGNYHAQLGHRTIIY
GVDQGMRGLCVGEKRRMTMHPDWGYGTSGTDNIPPNSVLVFDVHLLKVER
PGDGVETLDEKFEQNGGVTAENKLVLKDLYKKDPELCKMSSGQDDLIYWN
YKGKLLDGHVFDQGKFHAKLGHGQVITGVDKAMLGLCVGEKRRMFIHPDW
AYGARGVPGTIPPNSILIFDVELLSIEKPDGRRDEIDKHQEFSKKADPDH
EKLKIEVTYTVDSDKCDKQTRKGDTIKWHYIGTFTDGTEFHSGNYTAKLG
HRQVITGVDRGMLNMCVGEKRRLTIHPDWAYGKSGREGSIPPNATLIFDV
ELFEIDRPEDEKEEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009268	XLOC_009268	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00016580	TCONS_00016580	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001179	PPIase_FKBP_dom
IPR026257	FK506_BP

Vocabulary: **Biological Process**
Term	Definition
GO:0018208	peptidyl-proline modification
GO:0000412	histone peptidyl-prolyl isomerization

Vocabulary: **Cellular Component**
Term	Definition
GO:0005730	nucleolus

Vocabulary: **Molecular Function**
Term	Definition
GO:0005528	FK506 binding
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000412	histone peptidyl-prolyl isomerization
biological_process	GO:0018208	peptidyl-proline modification
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005528	FK506 binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 64..146 e-value: 6.6E-18 score: 64.7 coord: 318..402 e-value: 2.8E-26 score: 91.5 coord: 193..274 e-value: 4.4E-22 score: 78.1
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 67..149 score: 21.147
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 323..406 score: 25.523
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 194..277 score: 25.244
IPR026257	FK506-binding protein	PIRSF	PIRSF001473	FK506-bp_FPR3	coord: 55..149 e-value: 2.6E-15 score: 54.0 coord: 280..406 e-value: 2.3E-20 score: 70.6 coord: 192..277 e-value: 3.5E-20 score: 70.0
None	No IPR available	GENE3D	3.10.50.40		coord: 293..415 e-value: 2.2E-35 score: 121.2 coord: 34..156 e-value: 2.4E-25 score: 88.6
None	No IPR available	GENE3D	3.10.50.40		coord: 157..292 e-value: 1.6E-31 score: 108.7
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 55..153
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 166..280
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 310..411

Blast

[Close]

BLAST of TCONS_00016580-protein vs. Swiss-Prot (Human)
Match: FKBP9 (Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Homo sapiens GN=FKBP9 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 2.384e-61
Identity = 125/378 (33.07%), Postives = 187/378 (49.47%), Query Frame = 0

Query:   44 SDEKKLKLEDKYKVEDCKYRTQEHDIIHWHYKGMLLNGKNFGEGN-----YHAQLGHRTIIYGVDQGMRGLCVGEKRRMTMHPDWGYGTSGT-DNIPPNSVLVFDVHLLKVERPGDGVETLDEKFEQNGGVTAENKLVLKDLYKKDPELCKMSSGQDDLIYWNYKGKLLDGHVFDQG-----KFHAKLGHGQVITGVDKAMLGLCVGEKRRMFIHPDWAYGARGVPGTIPPNSILIFDVELLSIEKPDGRRDEIDKHQEFSKKADPDHEKLKIEVTYTVDSDKCDKQTRKGDTIKWHYIGTFTDGTEFHSG-----NYTAKLGHRQVITGVDRGMLNMCVGEKRRLTIHPDWAYGKSGREGSIPPNATLIFDVELFEI 405
            + E ++++   +K   C    Q  D + +HY G  L+G  F   +     Y   +G   +I G+D+G+ G+CVGEKR +T+ P   YG  G   +IP  + LVFDV LL +  P D +             + ENK+V        PE C+  S   D + ++Y G LLDG +FD        F   +G G VI G+D+ +LG+C+GEKRR+ + P   YG  G  G IP +++L+FD+ ++    P                         I +T       C   ++KGD +K+HY  +  DGT   S       Y   LG  QV+ G+D G+  MCVGEKR + I P   YG++G +G +P +A L+FD+EL E+
Sbjct:  143 NSEDQVQIHTYFKPPSCPRTIQVSDFVRYHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYGEDGDGKDIPGQASLVFDVALLDLHNPKDSI-------------SIENKVV--------PENCERISQSGDFLRYHYNGTLLDGTLFDSSYSRNRTFDTYIGQGYVIPGMDEGLLGVCIGEKRRIVVPPHLGYGEEG-RGNIPGSAVLVFDIHVIDFHNPSD----------------------SISITSHYKPPDCSVLSKKGDYLKYHYNASLLDGTLLDSTWNLGKTYNIVLGSGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLVFDIELLEL 476

HSP 2 Score: 200.675 bits (509), Expect = 1.322e-58
Identity = 119/389 (30.59%), Postives = 191/389 (49.10%), Query Frame = 0

Query:   39 PTGGVSDEKKLKLEDKYKVEDCKYRTQEHDIIHWHYKGMLLNGKNFG-----EGNYHAQLGHRTIIYGVDQGMRGLCVGEKRRMTMHPDWGYGTSGTDN-IPPNSVLVFDVHLLKVERPGDGVETLDEKFEQNGGVTAENKLVLKDLYKKDPELCKMSSGQDDLIYWNYKGKLLDGHVFDQG-----KFHAKLGHGQVITGVDKAMLGLCVGEKRRMFIHPDWAYGARGVPGTIPPNSILIFDVELLSIEKPDGRRDEIDKHQEFSKKADPDHEKLKIEVTYTVDSDKCDKQTRKGDTIKWHYIGTFTDGTEFHSG-----NYTAKLGHRQVITGVDRGMLNMCVGEKRRLTIHPDWAYGKSGREGSIPPNATLIFDVELFEIDRPEDE 411
            P  G+  + +L++E ++  ++C    +  D + +HY G   +G+ F      +  ++  +G   +I G+DQ + G+CV E+R + + P   YG  G    IPPNSVL FDV L+ +                     +E+++ +   +K  P  C  +    D + ++Y G  LDG +FD        +   +G G +I G+DK +LG+CVGEKR + I P  AYG  G    IP  + L+FDV LL +  P                      K  I +   V  + C++ ++ GD +++HY GT  DGT F S       +   +G   VI G+D G+L +C+GEKRR+ + P   YG+ GR G+IP +A L+FD+ + +   P D 
Sbjct:   26 PVAGLGSDAELQIERRFVPDECPRTVRSGDFVRYHYVGTFPDGQKFDSSYDRDSTFNVFVGKGQLITGMDQALVGMCVNERRFVKIPPKLAYGNEGVSGVIPPNSVLHFDVLLMDIW-------------------NSEDQVQIHTYFK--PPSCPRTIQVSDFVRYHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYGEDGDGKDIPGQASLVFDVALLDLHNP----------------------KDSISIENKVVPENCERISQSGDFLRYHYNGTLLDGTLFDSSYSRNRTFDTYIGQGYVIPGMDEGLLGVCIGEKRRIVVPPHLGYGEEGR-GNIPGSAVLVFDIHVIDFHNPSDS 370

The following BLAST results are available for this feature:

BLAST of TCONS_00016580-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00016580-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FKBP9	2.384e-61	33.07	Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Homo ...	[more]

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TCONS_00016580-protein (polypeptide) - C. hemisphaerica