TCONS_00016560-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016560-protein
Unique NameTCONS_00016560-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016560-protein ID=TCONS_00016560-protein|Name=TCONS_00016560-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
MADEYAADSAQISIEEKVEDNDNVNSNTQIADKESSDNVQASVITGKEDE
DSVGDLPYIVFDTETTGLDSNKDRIVQLSMTKVFSTERKEQLDIFINPEL
DREYQLQSKAYEIHNLHPDFLAKQKLFHEHAEEILKFFKGAKLVFGHNVR
FDWKFLVAAFTRLGNNEDEGKPWIDLLKEIDFKLLDTLKMSRAAYPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009254XLOC_009254Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016560TCONS_00016560Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 57..197
e-value: 1.7E-7
score: 40.9
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 59..178
e-value: 6.3E-18
score: 65.8
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 46..197
e-value: 7.1E-27
score: 93.7
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 56..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableCDDcd06127DEDDhcoord: 59..196
e-value: 2.89646E-29
score: 106.616

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016560-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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