TCONS_00016545-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016545-protein
Unique NameTCONS_00016545-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length746

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016545-protein ID=TCONS_00016545-protein|Name=TCONS_00016545-protein|organism=Clytia hemisphaerica|type=polypeptide|length=746bp
MATEKESSMRYNYFDFLLDKTGEVLKNYIDNPIKEPPPWQICKQYIEKSL
AVKASSPQLQTIPEFEGFQDQKIWQPLCLSMTLIAHMKWDLDKLQEKLPL
HLQQVVMEELLKGYDIPSTPQPEMFDMSKLSKREAMAHIIYNRWVVRTIT
KYEELKEKDILPINLSSVAREARENQEHSIFKQLKLKEHLSVDILEKALY
HEDDLLIPLPKARTIHKIDSQLIEPPPFQPQDQVPSATDQPHDSGASSTD
QDGSEPVTTPPKGLIMKVSPLLDVDIVVPLSDVISQICLDLGSYYFPKEM
FGDAGRVFQRAYDVQEKAGLKNELISSFHLACCHLTKQPVPDALKPSDLY
SRLDQSEQNQYQGVIEILKEDNLKQELSISRRLAVEKDVFLLDKRTLLFE
VCTCNFLRCCLDGCYSNAFAFYQSLHSADNKETDTFLQLCEEFYLTTQNT
QSKENIKNGFKICMEEFSEENKERLKESQFFNSLFSNNEKLLEPTIKKEK
METSFNQQLDYEMEDSTGGHFSRDIDNDERVSKLCKLKAQLITCXDNDER
VSKLCKLKAQLITCFEPETLKDILFELHEIPPEQSHAVAFEMKYYKEIFN
EIHDSLMRDTVHIFIAKSKQLTSQKQFTRALNILNTCLKILTSYATRASP
GCSTSRVKNIMHHELLWTELKFAEEDPDKANTSETMRRSKACIQHSNQNP
PPQPHVYLSIVAYLLNNRENQFLVDTCANFDLNIIEFQQIGYYISK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009245XLOC_009245Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016545TCONS_00016545Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00016545-protein vs. Swiss-Prot (Human)
Match: INT8 (Integrator complex subunit 8 OS=Homo sapiens GN=INTS8 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.028e-31
Identity = 179/756 (23.68%), Postives = 325/756 (42.99%), Query Frame = 0 
Query:   28 YIDNPIKEPPPWQICKQYIEKSLAVKASSPQLQTIPEFEGFQDQKIWQPL-CLSMTLIAHMKWDLDKLQEKLPLHLQQVVMEELLKGYDIPSTPQPEMFDMSKLSKREAMAHIIYNRWVVRTITKYE-ELKEKDILPINLSSVAREARENQ-EHSIFKQLKLKEHLSVDILEKALYHEDDLLIPLPKARTIHKIDSQLIEPPPFQPQDQVPSATDQPHDSGASSTDQDGSEPVTTPPKGLIMKVSPLLDVDIVVPLSDVISQICLDLGSYYFPKEMFGDAGRVFQRAYDVQEKAGLKNELIS---SFHLAC----------CHLTKQPVPDALKPSDLYSRLDQS----EQNQYQGVIEILKEDNLKQELSISRRLAVEKDVF--------LLDKRTLLFEVCTCNFLRCCLDGCYSNAFAFYQSLHSADNKETDTFLQLCEEFYLTTQNTQS-KENIKNGFK-ICMEEFSEENKERLKESQFFNSLFSNNE-KLLEPTIKKEKMETSFNQQLDYEMEDSTGGHFSRDIDNDERVSKLCKLKAQLITCXDNDERVSKLCKLKAQLITCFEPETLKDILFELHEIPPEQSHAVA---FEM-KYYKEIFNEIHDSLMRDTVHIFIAKSKQLTSQKQFTRALNILNTCLKILTSYATRASPGCSTSRVKNIMHHELLWTELKFAEEDPDKANT---SETMRRSKACIQHSNQNPPPQPHVYLSIVAYLLNNRENQFLVDTCANFDLNIIEFQQIGYYIS 745
            ++  P  +P P Q+  Q++E+     AS P +    + +   D K  + L  L++ + AH+KWDLD L++ L + +  +++ ELL    +P   +    D++ L    AMA ++YNRW +RTI +    +K+    P  LS + +  +E +   +I K LK +   S+ +LE AL    DL +      T+  +D   +EP                   G  + + + S        GL +K              ++  Q+C DLG+ YF +     A  V++ A   +EK     ELI+   S  L C          C      VP +   S   +   Q         YQ VI+I  EDNL   L +  R +V +++F         LD+  + F+VC CN +R  L+G  + +  F Q     + ++ D  L++C       + ++S K N+    K +C+     +    +   + F +L  + E KLL   ++K       + +++  ++  T  +   DI     V+                     + +L+ QLI   +P  ++ IL ELH +  E+        +E+   Y  +   I D+L RD V+I +AK    ++ K F+ A  +   CL+++T +    SP     +++ +M +E+L  ++   E    +A     S+ + R +  ++    + P +  +    VA++LN REN++L      F L    + ++G  ++
Sbjct:   37 HLRKPCPDPAPVQLIVQFLEQ-----ASKPSVNEQNQVQPPPDNKRNRILKLLALKVAAHLKWDLDILEKSLSVPVLNMLLNELLCISKVPPGTKHVDMDLATLPPTTAMAVLLYNRWAIRTIVQSSFPVKQAKPGPPQLSVMNQMQQEKELTENILKVLKEQAADSILVLEAALKLNKDLYV-----HTMRTLDLLAMEP-------------------GMVNGETESST------AGLKVKT------------EEMQCQVCYDLGAAYFQQGSTNSA--VYENA---REKFFRTKELIAEIGSLSLHCTIDEKRLAGYCQACDVLVPSSDSTSQQLTPYSQVHICLRSGNYQEVIQIFIEDNLTLSLPVQFRQSVLRELFKKAQQGNEALDE--ICFKVCACNTVRDILEG-RTISVQFNQLFLRPNKEKIDFLLEVCSRSVNLEKASESLKGNMAAFLKNVCLGLEDLQYVFMISSHELFITLLKDEERKLLVDQMRKR------SPRVNLCIKPVTSFY---DIPASASVN---------------------IGQLEHQLILSVDPWRIRQILIELHGMTSERQFWTVSNKWEVPSVYSGVILGIKDNLTRDLVYILMAKGLHCSTVKDFSHAKQLFAACLELVTEF----SP-----KLRQVMLNEMLLLDIHTHEAGTGQAGERPPSDLISRVRGYLEMRLPDIPLRQVIAEECVAFMLNWRENEYLTLQVPAFLLQSNPYVKLGQLLA 698
The following BLAST results are available for this feature:
BLAST of TCONS_00016545-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INT81.028e-3123.68Integrator complex subunit 8 OS=Homo sapiens GN=IN... [more]
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