TCONS_00016536-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016536-protein
Unique NameTCONS_00016536-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length857

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016536-protein ID=TCONS_00016536-protein|Name=TCONS_00016536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=857bp
SLKKPKINYRSMRVKALRQRANANWLLVRSMLSDIVDFGRVTGRVFSPMK
FTAYKQRSSPTIMKLKRFRAKKLRARANWLLVSSRVKDIVRYPDKLRRER
VTWDSYLVELNMNRRKATRNKYVAGVLRARANWMLVRSRIPDIILYGKYR
RYSKKELPESRHASPVKTKSKPLKRSESDRVRSRRTEKPIVGTDKLQRSS
TKHRNNDDEKRRKHHQHRSTKIKSPRHSRKGATQIALENWSKLVQNTQQA
VKRTPSTKSKSNKEVYKSWDDLIQRTSTSDKKKKVHRSSSTRRKQNALNN
WDNLTAHTNTKDQQKSKEALDNWDQLVKKTKGTNVQRSTSLKSKGEAPHK
NWDILIQNTSREIKQRSSLRSKDAFMNWDNLLRSKNTDQKKSLENWDHLI
VGTSTLSSPRRAKSVERLSRRSQSEQHWHDLFDSAKREKRDADGNWHRLT
GNAHYEKEAADRNWGHLVHSTKTPPKSSNRAKKGWDKIRTSLGRNLTHKA
DKGQPVMSQAQEDRAYKNWWTLISTDEDSKRPAAKEDIRDKAVCKTTEDL
VCTSQANDTEATACQNWNSLIKGTDTSDVERTNKKALEDWYQLISRTEVE
SVNKDEAINNWHNLIRMVSTTNEEAEQNWHQLIQSVQPTADMSTEAENHW
HNLIKAKKTGPMYNSEKALYHWDKLIEGRIIRRTASQTPSSSMSTRDGVM
DSLRKHPSKDGTFKKVSDTPPSGFRLLYDKNQAQSTGNHEPKVMRLNIRN
DFGQFNDVRLKMTSPNKSMLSAHLKENTDGTFTIFCCPSIDEPFNICVSL
GGSQFENDVQVLTLKGDLSLLKTQVATRLACKTISLIRWHLTPGLLSKQG
EKIVAGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009240XLOC_009240Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016536TCONS_00016536Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 725..808
e-value: 0.0022
score: 17.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 685..716
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..511

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016536-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top