|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00016475-protein ID=TCONS_00016475-protein|Name=TCONS_00016475-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1106bp
MSVTVNTFIEDCKKDLSGQRHIFPRNMAMYKNMVFAQDEILEADKTSTHK
LKKAMKTLQTAAQGNVQNEVTYAESMEKLGSVALSREAETGIGTAFLKLS
VITKELANHRKILCENFNNMVLFPINSLLKGDMNKIGDMKRPVDDAWKEY
KSKGIKKEQRKKTSEIILYRIDQPEQTAEGSERERRTFMYHTSEYLSKAN
DIKMKKGVELVQHLIEHYHAQLRYFNSGIKLLEGMRSYFEGLADELQKRK
LEKEEEKKELSDIKSNLKTILQLDSKEVDKSSGRQNYKIHGQQGDKVFGG
SKSGHLHKRSEGVRKQWQKRYCVISNGLFTLAHNQQSAPTATLPLLTCQV
KPMAEKDKKLQFALVAHNRTYLFQAEDEADYEAWISVLSNAREEALNKAF
GEGEDALSKEPVSSIQELTQGIISEVRRLPGNNQCIDCNAYDPTWLSTNL
GVVVCIECSGIHRELGVHVSRIRSLTLDRLGTAELLLARAVGNSDFNEIM
EASLDPSLKPTAGSNMDQRKEFITQKYVQKAFINPSGHQPNILIEDLQRA
INHHDILAVLQLYADGVDFNSSLPDSNLNDTSLHYCVEKEDLTSLHIVDF
ITQNCKNVNAMNTEGNTALHIAAMHDKPECTKLLVRYGANLQALNRQGKS
ALEIAKHNKFTEIIELLSDDGKTGKFDHVKIDWGLHETEDIYATPLDLIN
TSDRPEDPPKDYDQKVKSTPVAQDTTISPSVKQPLPQHGGLATQGPIQRS
MTSPKSRSTVNTPVVSTTTDITTLTTANTSSQQARHSIALPHNYQVLPSA
GQTDGKFPPPLPPSRRPTTKQKGPVPPPKPDTASKPTDVNATTSSTGPTV
AIINTTSSGVTQPKETMTNLTASSVPLSLSTFTAKQSASAAANKNNPSTQ
PHPTLVDKSSLPPAPPTRSSSFLPRGSTEEMLPRPDRPPPPVPSVGAGHN
RNRSEGGMLFNQQDFLDDIAAATRNRTNSLVTPKPGAIEFPIPLDPDAPP
LPPPRPKNNEPPSPNNHMQVPASPPATSHTPLRSSSISRKEPKTKFRRAK
ALYDCEADHSDELTFVEGEIIIMKGEADPDWWFGEIEGDPTRRGVFPISF
VHVLND Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005096 | GTPase activator activity |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005096 |
GTPase activator activity |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 239..273 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 1027..1106
e-value: 2.1E-17
score: 63.1 |
| None | No IPR available | PFAM | PF16746 | BAR_3 | coord: 45..260
e-value: 9.5E-14
score: 51.6 |
| None | No IPR available | GENE3D | 1.20.1270.60 | | coord: 22..238
e-value: 2.6E-33
score: 114.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 291..310 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 699..765 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 797..866 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 977..1043 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 886..956 |
| None | No IPR available | CDD | cd11821 | SH3_ASAP | coord: 1048..1100
e-value: 1.10786E-30
score: 115.49 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 547..667
e-value: 5.74468E-20
score: 87.0538 |
| None | No IPR available | SUPERFAMILY | 57863 | ArfGap/RecO-like zinc finger | coord: 420..534 |
| IPR001164 | Arf GTPase activating protein | PRINTS | PR00405 | REVINTRACTNG | coord: 451..468
score: 58.24
coord: 432..451
score: 46.9
coord: 472..493
score: 31.19 |
| IPR001164 | Arf GTPase activating protein | SMART | SM00105 | arf_gap_3 | coord: 420..540
e-value: 1.9E-39
score: 147.1 |
| IPR001164 | Arf GTPase activating protein | PFAM | PF01412 | ArfGap | coord: 422..534
e-value: 1.3E-35
score: 121.9 |
| IPR001164 | Arf GTPase activating protein | PROSITE | PS50115 | ARFGAP | coord: 420..540
score: 25.172 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 647..678
e-value: 1200.0
score: 4.5
coord: 614..643
e-value: 1.6E-5
score: 34.3
coord: 578..610
e-value: 23.0
score: 13.9 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 614..646
score: 12.743 |
| IPR001452 | SH3 domain | SMART | SM00326 | SH3_2 | coord: 1047..1105
e-value: 1.5E-15
score: 67.7 |
| IPR001452 | SH3 domain | PFAM | PF14604 | SH3_9 | coord: 1051..1101
e-value: 4.0E-10
score: 39.3 |
| IPR001452 | SH3 domain | PROSITE | PS50002 | SH3 | coord: 1044..1106
score: 14.268 |
| IPR001452 | SH3 domain | SUPERFAMILY | 50044 | SH3-domain | coord: 1021..1105 |
| IPR001849 | Pleckstrin homology domain | SMART | SM00233 | PH_update | coord: 300..395
e-value: 6.8E-17
score: 72.1 |
| IPR001849 | Pleckstrin homology domain | PFAM | PF00169 | PH | coord: 302..391
e-value: 7.8E-14
score: 52.0 |
| IPR001849 | Pleckstrin homology domain | PROSITE | PS50003 | PH_DOMAIN | coord: 299..393
score: 15.14 |
| IPR011993 | PH domain-like | GENE3D | 2.30.29.30 | | coord: 239..401
e-value: 9.1E-22
score: 76.9 |
| IPR011993 | PH domain-like | SUPERFAMILY | 50729 | PH domain-like | coord: 301..400 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 545..900
e-value: 3.2E-24
score: 84.8 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 583..671
e-value: 9.8E-10
score: 38.8 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 547..671
score: 22.543 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 545..686 |
| IPR027267 | Arfaptin homology (AH) domain/BAR domain | SUPERFAMILY | 103657 | BAR/IMD domain-like | coord: 35..264
coord: 297..322 |
Blast
BLAST of TCONS_00016475-protein vs. Swiss-Prot (Human)
Match: ASAP1 (Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=ASAP1 PE=1 SV=4) HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0 Identity = 321/696 (46.12%), Postives = 463/696 (66.52%), Query Frame = 0
Query: 3 VTVNTFIEDCKKDL-SGQRHIFPRNMAMYKNMVFAQDEILEADKTSTHKLKKAMKTLQTAAQGNVQNEVTYAESMEKLGSVALSREAETGIGTAFLKLSVITKELANHRKILCENFNNMVLFPINSLLKGDMNKI-GDMKRPVDDAWKEYKSK--GIKKEQRKKTSEIILYRID-QPEQTAEGSERERRTFMYHTSEYLSKANDIKMKKGVELVQHLIEHYHAQLRYFNSGIKLLEGMRSYFEGLADELQKRKLEKEEEKKELSDIKSNLKTILQLDSKEVDKSSGRQNYKIHGQQGDKVFGGSKSGHLHKRSEGVRKQWQKRYCVISNGLFTLAHNQQSAPTATLPLLTCQVKPMAEKDKKLQFALVAHNRTYLFQAEDEADYEAWISVLSNAREEALNKAFGEGEDALSKEPVSSIQELTQGIISEVRRLPGNNQCIDCNAYDPTWLSTNLGVVVCIECSGIHRELGVHVSRIRSLTLDRLGTAELLLARAVGNSDFNEIMEASL-DPSLKPTAGSNMDQRKEFITQKYVQKAFINPSGHQPNILIEDLQRAINHHDILAVLQLYADGVDFNSSL--PDSNLNDTSLHYCVEKEDLTSLHIVDFITQNCKNVNAMNTEGNTALHIAAMHDKPECTKLLVRYGANLQALNRQGKSALEIAKHNKFTEIIELLSDDGKTGKFD---HVKIDWGLHE 687
++V+ FI + +D S F + +N V +E L+ D+T+ K+KK++K + + Q +VQNE YA+ ++K GS LSR+ +GTAF+K S +TKEL+ K L + ++ V+F ++SLLKGD+ + GD+K+P D AWK+Y++K I+KE+R+ + + R + + AE E+ERR F EYL K N+IK KKGV+L+Q+LI++YHAQ +F G+K + ++ Y E LA +L K ++EEKK+L+ ++ +K+ LQLD KE D S + Y +H QG+K +G K G+L K+S+G+RK WQ+R C + NG+ T++H + A L LLTCQVKP AE DKK F L++HNRTY FQAEDE DY AWISVL+N++EEAL AF GE + + +S+++LT+ II +V+RLPGN+ C DC + +PTWLSTNLG++ CIECSGIHRE+GVH+SRI+SL LD+LGT+ELLLA+ VGN+ FN+IMEA+L PS KPT S+M RKE+IT KYV F + + + +L AI D+LA++Q+YA+GV+ L P L +T+LH V D TSLH+VDF+ QNC N++ GNT LH +M+ KPEC KLL+R + +N+ G++AL+IAK K T+ +LLS K+GKF+ HV+ +W L +
Sbjct: 25 ISVSEFIAETTEDYNSPTTSSFTTRLHNCRNTVTLLEEALDQDRTALQKVKKSVKAIYNSGQDHVQNEENYAQVLDKFGSNFLSRD-NPDLGTAFVKFSTLTKELSTLLKNLLQGLSHNVIFTLDSLLKGDLKGVKGDLKKPFDKAWKDYETKFTKIEKEKREHAKQHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKE-DSQSRQGGYSMHQLQGNKEYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNRQPAKLNLLTCQVKPNAE-DKK-SFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAF-RGEQSAGE---NSLEDLTKAIIEDVQRLPGNDICCDCGSSEPTWLSTNLGILTCIECSGIHREMGVHISRIQSLELDKLGTSELLLAKNVGNNSFNDIMEANLPSPSPKPTPSSDMTVRKEYITAKYVDHRFSRKTCSTSSAKLNELLEAIKSRDLLALIQVYAEGVELMEPLLEPGQELGETALHLAVRTADQTSLHLVDFLVQNCGNLDKQTALGNTVLHYCSMYSKPECLKLLLRSKPTVDIVNQAGETALDIAKRLKATQCEDLLS-QAKSGKFNPHVHVEYEWNLRQ 711
The following BLAST results are available for this feature:
|
