TCONS_00016435-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016435-protein
Unique NameTCONS_00016435-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016435-protein ID=TCONS_00016435-protein|Name=TCONS_00016435-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1188bp
MTNFDKMKVLPLAVACLIASFLLIQCNGQDVVGCGGFVESPIPIKFEQVE
IKLYTKQGAFKSKTECAPKNGYFLVAIYDKGEYVLKISPPEGWGFKPQEI
ELNIDGNDPCSKGEDLNFKFSGFTVSGNVLSLGKETGPSGVNVHLKNSEG
KVISETTTSDSGSYIFPDVMPGNYISEASHPTWTLTNNRIQLNVLEDNVK
IESILVSGYDVKGHVLSSGEPIQDVVFILFSNEKKSVKNCQEVPKEYLAA
NKIDQNEIPLCSVKSQADGSFVFPSVPSGSYNLVPFYTAQNIVFDIVPGK
LAFSVNLKSVMMKTPFQVYGFSVKGKVIDTIKSGIGGVEIVVTNDVGESK
TALTSDNGEYMLENITTGHYTFKLSKENYIFEESKTHISPNVPTLKDIVA
TEYKICGSIVIKQMPPGVRQLSQLKVLLQPVDQKDGKPKSTAVTKNGHFC
FQSTPGKFRVEIPIIESEAKAGLRLRPTHVDVHLVNKPLTDIKFEQFLAT
VFGDIHCIKECSDVSVYLMPSESSSTLKLLGTVEGAGSKLSFSIPDVLPG
KYKLIPKRKNWCWEDQQQTIEINDQDIRNVQLKHSGYHLKCSISHNISLN
FALEGEKEQLGSFELKKGNNQFCLKTPGTYVLKPVSCYRFEHDEYIYKTE
EPQTLSLKVAFYKTEYTIRTTKNVTDLALQIKSQSSGQIETKTPVYQGTE
ERFSVYKIQTWGKLSEELELTPQSKEVLFTPPSLVTTIAESCPGATADFE
GHEGIFIQGDITPPFADVSVTIKILQGTGDEQQVERTIEVMTDAKGAYRV
GPMHGGTQYEVSAVKDGYHITPVANKKGSFIAQKLGHISVLVLDERGKGM
ENVLLSLSGRQYRNNNLTNKDGAFLFSNLGPGEYFLRPMQKEYSFEASSQ
TISVTEGQDIVINIKGKRVAFSCSGSVTSLAGVPEEKIAIEAVGLHKCSE
YHESTISDANGDFRIRGLQPGCSYNVRLMRNEANEGVERLAPDNHVIQVQ
QEDVTGVHFLVFMKPTKFVLTAHLDTEDKLLSTIKVLLYEEDDLDSPVHS
ISPGVVKFIQFPALKPKTYIIKVQSTLSGRSHDIVTSSATIKPDADLGKK
HVNLKFEAKEKNVDLEPTQSVITLPLAVALLFLAYNYDSVITFLTKVNIF
LQTLSGNKQEGVDGVEETPEDYFQPAHTGGRLTKRKKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009177XLOC_009177Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016435TCONS_00016435Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033764Sdr_B
IPR013783Ig-like_fold
IPR013784Carb-bd-like_fold
IPR008969CarboxyPept-like_regulatory
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030246 carbohydrate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033764SD-repeat containing protein, B domainPFAMPF17210SdrD_Bcoord: 134..183
e-value: 4.3E-7
score: 30.1
NoneNo IPR availableGENE3D2.60.40.1120coord: 322..415
e-value: 4.4E-9
score: 36.2
NoneNo IPR availableGENE3D2.60.40.1120coord: 119..203
e-value: 1.4E-9
score: 37.5
NoneNo IPR availablePFAMPF13620CarboxypepD_regcoord: 322..379
e-value: 7.4E-9
score: 35.7
NoneNo IPR availableGENE3D2.60.40.1120coord: 830..917
e-value: 4.6E-10
score: 39.2
coord: 512..586
e-value: 0.47
score: 10.3
coord: 745..828
e-value: 0.0055
score: 16.5
coord: 918..1012
e-value: 8.8E-4
score: 19.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1160..1188
NoneNo IPR availableSUPERFAMILY49478Cna protein B-type domaincoord: 124..192
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 41..112
e-value: 0.022
score: 14.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 204..311
e-value: 3.9E-6
score: 26.1
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 831..914
IPR008969Carboxypeptidase-like, regulatory domainSUPERFAMILY49464Carboxypeptidase regulatory domain-likecoord: 322..416

Blast
[Close]
BLAST of TCONS_00016435-protein vs. Swiss-Prot (Human)
Match: NOMO1 (Nodal modulator 1 OS=Homo sapiens GN=NOMO1 PE=1 SV=5)

HSP 1 Score: 800.816 bits (2067), Expect = 0.000e+0
Identity = 468/1222 (38.30%), Postives = 688/1222 (56.30%), Query Frame = 0 
Query:   11 PLAVACLIASFLLI-----QCNGQD--VVGCGGFVESPIPIKFEQVEIKLYTKQGAFKSKTECAPKNGYFLVAIYDKGEYVLKISPPEGWGFKPQEIELNIDG-NDPCSKGEDLNFKFSGFTVSGNVLSLGKETGPSGVNVHLKN--SEGKVISETTTSDSGSYIFPDVMPGNYISEASHPTWTLTNNRIQLNVLEDNVKIES-ILVSGYDVKGHVLSSGEPIQDVVFILFSN--EKKSVKNCQEVPKEYLAANKIDQNEIPLCSVKSQADGSFVFPSVPSGSYNLVPFYTAQNIVFDIVPGKLAFSVNLKSVMMKTPFQVYGFSVKGKVIDTIKSGIGGVEIVVTNDVGESKTALTSDNGEYMLENITTGHYTFKLSKENYIFEESKTHISPNVPTLKDIVATEYKICGSIVIKQMPPGVRQLSQLKVLLQPVDQKDGKPKSTAVTKNGHFCFQSTPGKFRVEIPIIESEAKAGLRLRPTHVDVHLVNKPLTDIKFEQFLATVFGDIHCIKECSDVSVYLMPSESSSTLKLLGTVEGAGSKLSFSIPDVLPGKYKLIPKRKNWCWEDQQQTIEINDQDIRNVQLKHSGYHLKCSISHNISLNFALEGE-KEQLGSFELKKGNNQFCLKTPGTYVLKPVSCYRFEHDEYIYKTEEPQTLSLKVAFYKTEYTIRTTKNVTDLALQIKS----------------------QSSGQIE------------------TKTPVYQGTEER---FSVYKIQTWGKLSEELELTPQSKEVLFTPPSLVTTIA-ESCPGATADFEGHEGIFIQGDITPPFADVSVTIKILQGTGDEQQVERTIEVMTDAKGAYRVGPMHGGTQYEVSAVKDGYHITPVANKKGSFIAQKLGHISVLVLDERGKGMENVLLSLSGRQYRNNNLTNKDGAFLFSNLGPGEYFLRPMQKEYSFEASSQTISVTEGQDIVINIKGKRVAFSCSGSVTSLAGVPEEKIAIEAVGLHKCSEYHESTISDANGDFRIRGLQPGCSYNVRLMRNEANEGVERLAPDNHVIQVQQEDVTGVHFLVFMKPTKFVLTAHLDTEDKLLSTIKVLLYEEDDLDSPVHSISPGVVKFIQFPAL--KPKTYIIKVQSTLSGRSHDIVTSSATIKPDADLGKKHVNLKFEAKEKNVDLEPTQ-SVITLPLAVALLFLAYNYDSVITFLTKVNIFLQTLSGNKQEGVDGVEETPED 1171
            PL  A + A+ +L+       +G +  VVGCGGFV+S + I +  +EIKLYTK G  K +T+CAP NGYF++ +YDKG+++LKI PP GW F+P  +EL++DG +D C+KG D+NF F+GF+V+G VLS G+  GP+GV V L+N  +E K I  T T   G + F  V+PG+Y   A+HPTW L      + V   N    S ++V+GY+V G V S GEP++ V F+LFS+   K+ V  C   P         D++ + LC   S+ DGSF F S+PSG Y ++PFY  + I FD+ P +L F+V   S+ ++  F V GFSV G+V++    G G  E VVT  +       T  +G + LENITTG YT    KE+  FE     I+PN P L DI+AT + +CG I I + P  V+Q+++ KV+L   D KD    +     +G FCF++ PG ++V++ + E+E +AGL L+P    + + N+P+ D+ F QFLA+V G + C+  C D+ V L  S S    K    + G  + ++F+  +VLPGKYK+    ++WCW+++   +E+ + D+  V+ + +GY L+CS+SH I+L F  +G  +E +G + L KG N+FCL  PG Y + P SC+RFE   Y Y T  P  L+L    +    TI TT  + D+ + IKS                      Q   +IE                  TK PV +  +E    FS Y    W +  E++ +TP SKE+LF PPS+   ++ ESCPG   +  G  G+F++G I P    V + I       ++      I V TD KGAY VGP+H   +Y V++ K+GY +T V    G F A  L  +S  +  E  + +  VLLSLSG  +R+N LT  +G   FSNL PG+Y+ +PM KE+ FE SSQ I V EGQ++ I I G R A+SC G+V+SL G PE+ +A+EAVG + CS Y E T++D  G FR+RGL PGC Y+V+L + E N+ +ER  P + VI+V   D+  V+ +VF +  +F L+ ++ T  + L T+ V LY+ ++LD+P+ ++S G   F  FP L    + Y++ + STL    +D +    +    A    KH+ L F    K  + +  Q S I LPL + +L   YN+D +I  L ++   LQ +    Q   D     PED
Sbjct:    9 PLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAK-IQSTVTQPGGKFAFFKVLPGDYEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGCNVSPVPGFQPQ--DESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERITFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNG-PEGDGVPEAVVT--LNNQIKVKTKADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIIATGFSVCGQISIIRFPDTVKQMNKYKVVLSSQD-KDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLKPQTFPLTVTNRPMMDVAFVQFLASVSGKVSCLDTCGDLLVTLQ-SLSRQGEKRSLQLSGKVNAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDMSAVEFRQTGYMLRCSLSHAITLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILTLTAIRHHVLGTI-TTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQEREKNGNEEGEERMTKPPVQEMVDELQGPFS-YDFSYWARSGEKITVTPSSKELLFYPPSMEAVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVIS------EKGASSPLITVFTDDKGAYSVGPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGGLFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTAYSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQL-KAEGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKSENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFT--AVGYHKHITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVRALGQAASD--NSGPED 1209
The following BLAST results are available for this feature:
BLAST of TCONS_00016435-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOMO10.000e+038.30Nodal modulator 1 OS=Homo sapiens GN=NOMO1 PE=1 SV... [more]
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