TCONS_00016331-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00016331-protein
Unique Name	TCONS_00016331-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	413

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00016331-protein ID=TCONS_00016331-protein|Name=TCONS_00016331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=413bp
MIIDVEEILDLSFINPNNIFEQLQDTGDFYIHQRAVNAWNLLSREKDYDN
ACAQSQVLLDKTWEHLNTGYWKDVKLVWRHLYTLASLMKTCSLYCLSDTQ
SALKACDMGLLMGAPIFDNVLGKLASKLSEILRKKKDVDDVVEPVSKKIK
GCIEYGRANYLPTDDVSKIENRIQEKFSIPKIDNISLIEFQENYLKTETP
VIIQNAMNHWPAMEGPRKWGIDYLRTVAGSRTVPVEIGDKYTSDNWTQTL
MSVNDFIDKYIANRTNTGYLAQHQLFDQVPELKNDILPPDYCYLSDSEAE
RPILMHAWFGPTGTVSPLHHDPYQNILAQVMGSKYIRLYSRDSPHMYANV
DSILDNTSQVDLENIDQERFPDFHRNVYHECLLNEGEMLFIPFKSWHFVK
SLSTSFSVSFWWK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009113	XLOC_009113	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00016331	TCONS_00016331	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003347	JmjC_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003347	JmjC domain	SMART	SM00558	cupin_9	coord: 268..413 e-value: 0.0013 score: 10.6
IPR003347	JmjC domain	PROSITE	PS51184	JMJC	coord: 277..413 score: 20.86
None	No IPR available	GENE3D	2.60.120.650		coord: 180..413 e-value: 2.6E-52 score: 177.3
None	No IPR available	PFAM	PF13621	Cupin_8	coord: 189..413 e-value: 3.7E-39 score: 134.9
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 178..412

Blast

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BLAST of TCONS_00016331-protein vs. Swiss-Prot (Human)
Match: KDM8 (Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 7.608e-115
Identity = 181/386 (46.89%), Postives = 242/386 (62.69%), Query Frame = 0

Query:   33 QRAVNAWNLLSREKDYDNACAQSQVLLDKTWEHLNTGYWKDVKLVWRHLYTLASLMKTCSLYCLSD----TQSALKACDMGLLMGAPIFDNVLGKLASKLSEILRKKKDVDDVVEPVSKKIKGCIEYGRANYLPTDDVSKIENRIQEKFSIPKIDNISLIEFQENYLKTETPVIIQNAMNHWPAMEGPRKWGIDYLRTVAGSRTVPVEIGDKYTSDNWTQTLMSVNDFIDKYIANRT-NTGYLAQHQLFDQVPELKNDILPPDYCYLSDSEAERPILMHAWFGPTGTVSPLHHDPYQNILAQVMGSKYIRLYS-RDSPHMYANVDSILDNTSQVDLENIDQERFPDFHRNVYHECLLNEGEMLFIPFKSWHFVKSLSTSFSVSFWW 412
            QRA      L  E   D     S+V+LD +WE LNTG W+DV   WR +Y +  L+K   L    +      +AL+ CDMGLLMGA I  ++L K+A+ L   L  K+         S   + C +  RA++    DV K+E       ++P++   SL  F+E +L    PVI++   +HWP M+   KW ++Y++ +AG RTVPVE+G +YT + W+QTLM+VN+FI KYI N   + GYLAQHQLFDQ+PELK DI  PDYC L D E E  I ++AWFGP GT+SPLH DP QN L QVMG KYIRLYS ++S  +Y +   +L NTSQVD+EN D E+FP F +  +  C+L+ GE+LFIP K WH+V++L  SFSVSFWW
Sbjct:   50 QRATE----LFYEGRRDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAALRVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARG-----SLPEQPCTKKARADHGLIPDV-KLEK------TVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQ---KWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEE-ITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWW 415

The following BLAST results are available for this feature:

BLAST of TCONS_00016331-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00016331-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KDM8	7.608e-115	46.89	Lysine-specific demethylase 8 OS=Homo sapiens GN=K...	[more]

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TCONS_00016331-protein (polypeptide) - C. hemisphaerica