TCONS_00016314-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016314-protein
Unique NameTCONS_00016314-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length274

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016314-protein ID=TCONS_00016314-protein|Name=TCONS_00016314-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
MTGLNLNKIYTPRKEALQNPIYKVMEKEEYEMTEKERIEEGQRRLQMPDL
MTRRKPINFVHSQDEQLINHDEDGSDFVFTDISASKNIRSRSIFVRENDT
GVLREASWEERDRMQFMYWPKEGQHHEIVEMLQDQHLPRVFDQLRHVDVL
DFINIQCEPDSPDFIRVHERVYEDLDQRQEYDILHSTRHFGGMVHHYVSK
DKTTKFFSYLVRNGRTEDAMDLLNLYKIINPDSEFSIESKELGDEDLLKY
YVQFHGLHEISEYLDSAPQQSGSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009100XLOC_009100Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016314TCONS_00016314Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019374Ribosomal_S22_mit
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019374Ribosomal protein S22, mitochondrialPFAMPF10245MRP-S22coord: 1..231
e-value: 2.3E-66
score: 223.9

Blast
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BLAST of TCONS_00016314-protein vs. Swiss-Prot (Human)
Match: RT22 (28S ribosomal protein S22, mitochondrial OS=Homo sapiens GN=MRPS22 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 7.506e-58
Identity = 101/255 (39.61%), Postives = 161/255 (63.14%), Query Frame = 0 
Query:    1 MTGLNLNKIYTPRKEALQNPIYKVMEKEEYEMTEKERIEEGQRRLQMPDLMTRRKPINFVHSQDEQLINHDEDGSDFVFTDISASKNIRSRSIFVRENDTGVLREASWEERDRMQFMYWPKEGQHHEIVEMLQDQHLPRVFDQLRHVDVLDFINIQCEPDSPDFIRVHERVYEDLDQRQEYDILHSTRHFGGMVHHYVSKDKTTKFFSYLVRNGRTEDAMDLLNLYKIINPDSEFSIESKELGDE--DLLKYYVQ 253
            MTGLNL K + P  + L+ P YK+M + + E   ++ +E  + RL+MP ++  R PIN V ++D+  I    + + +VFTDIS S   R R I VRE  +G LR+ASWEERDRM  +Y+PKEG+      + ++++L  ++ Q RHVDVL+    Q EPDS ++I+VH + YED+D+R +YD+L STR+FGGMV ++V+  K        ++    +DA +L+ LY +++PD + +  +K+   E  +L+K + +
Sbjct:   82 MTGLNLQKTFKPAIQELKPPTYKLMTQAQLEEATRQAVEAAKVRLKMPPVLEERVPINDVLAEDK--ILEGTETTKYVFTDISYSIPHRERFIVVRE-PSGTLRKASWEERDRMIQVYFPKEGRKILTPIIFKEENLRTMYSQDRHVDVLNLCFAQFEPDSTEYIKVHHKTYEDIDKRGKYDLLRSTRYFGGMVWYFVNNKKIDGLLIDQIQRDLIDDATNLVQLYHVLHPDGQSAQGAKDQAAEGINLIKVFAK 333
The following BLAST results are available for this feature:
BLAST of TCONS_00016314-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RT227.506e-5839.6128S ribosomal protein S22, mitochondrial OS=Homo s... [more]
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