TCONS_00016263-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016263-protein
Unique NameTCONS_00016263-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1065

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016263-protein ID=TCONS_00016263-protein|Name=TCONS_00016263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1065bp
MGQKCTAPQILQDDEVFKNNSKQNKTGFYLTNRNRRKSSTSDQTKDEKRR
RRKSSAKETQDGVTLNGSVRKRTGEKSNGNTETLTVSPSTDQDEFVLQTF
CKSPLTPHKRLSIHHGHDDFAFDRPQDKDDGKIRHVDFDAISIAKVTEEQ
YAESLDENRNSEKMKDVTMGQGHGKEDQLAENEPKTVENELRTAGNELRT
AKNEEAKLYKDVDASEIIFEEDSQSKDESKSENSEVLVKVNEFVESNENK
IDEKERQIVETGIVESVTENVNREPPAKRLSKFKLFVFQEYADRMSDRIL
SNTSTTLDQFHDSQVDFAEDLSLTVLYEARKEVYNNTSTSTQANDEENNN
NESTLDMIADKLVDQILFGKTSPQNKLASTATIEKPPEPSEKAAIPSDST
ISVENDNKLDVEDGAIKTDYGRPLSGYAKNLADFLADDDEFELSDAEDED
AKEEIARPRSVGARPSREGARDSQEESDYEDTEDDEDELSDDEDESFLDE
ENVSFENDDERTTIFVNADFVDDEVAKKEKLETKEFETQKLQEPLETSAV
EKQEPEIKIETENKKAKTSQYAPAVKRRQNNRRTRGERPKSLYEQDLQEI
FNEIKMPADEDGGNDDQDDSKEVLEDGIKPVSETMNFLENHIEAKRNMMK
RNEEEEEEYLMMDEDEHVSNNSSDLLGCQKTKKVSQQKPPVLGRAAVIDF
GCGALKAGLSGDIRPSCYCPSVIGVPRRFSQDVSKMKKGFYVGDEAWEIA
GMLQIEHPIKQEINNWSDIGNIFEYLYDEELKINSNEHPMLLTEPGLTSS
THREKLIEVIFERFSAPSLMLANQSCLALYSKGLVTGLSLNSGFYFTQST
PIYEGHALPYATTQLDIGGDTITNYLNRNIMSTQGHQFNTSSEKLLLNSM
KQDLCYVALDPSSEEEKYRDHPDKMNESFALPDGQEITIGLERFSTPEIM
FDPSLIGIRNQLNVVDTVLESCSRVDEDLRDILFENILVSGGNSKLKGFN
QRLEHELKKQPTDQRITALKYADNALLSTWVGGSVLASIAGYRDQWISMD
LYAEYGANIVHKMCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009088XLOC_009088Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016263TCONS_00016263Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 635..665
NoneNo IPR availableGENE3D3.30.420.40coord: 1024..1065
e-value: 2.1E-4
score: 20.5
NoneNo IPR availableGENE3D3.90.640.10coord: 868..945
e-value: 2.7E-24
score: 84.5
NoneNo IPR availableGENE3D3.30.420.40coord: 946..1023
e-value: 4.1E-13
score: 48.4
NoneNo IPR availableGENE3D3.30.420.40coord: 693..866
e-value: 1.7E-39
score: 134.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..186
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 833..1065
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 695..833
IPR004000Actin familyPRINTSPR00190ACTINcoord: 802..815
score: 42.28
coord: 714..723
score: 30.13
coord: 771..789
score: 31.04
coord: 925..941
score: 55.68
coord: 737..748
score: 56.91
coord: 827..846
score: 43.36
IPR004000Actin familySMARTSM00268actin_3coord: 693..1065
e-value: 3.2E-97
score: 338.9
IPR004000Actin familyPFAMPF00022Actincoord: 695..1065
e-value: 7.1E-91
score: 304.7

Blast
[Close]
BLAST of TCONS_00016263-protein vs. Swiss-Prot (Human)
Match: ACTG (Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 4.305e-84
Identity = 144/373 (38.61%), Postives = 225/373 (60.32%), Query Frame = 0 
Query:  695 AAVIDFGCGALKAGLSGDIRPSCYCPSVIGVPRRFSQDVSKMKKGFYVGDEAWEIAGMLQIEHPIKQEI-NNWSDIGNIFEYLYDEELKINSNEHPMLLTEPGLTSSTHREKLIEVIFERFSAPSLMLANQSCLALYSKGLVTGLSLNSGFYFTQSTPIYEGHALPYATTQLDIGGDTITNYLNRNIMSTQGHQFNTSSEKLLLNSMKQDLCYVALDPSSEEEKYRDHPDKMNESFALPDGQEITIGLERFSTPEIMFDPSLIGIRNQLNVVDTVLESCSRVDEDLRDILFENILVSGGNSKLKGFNQRLEHELKK-QPTDQRITALKYADNALLSTWVGGSVLASIAGYRDQWISMDLYAEYGANIVHKMCF 1065
            A VID G G  KAG +GD  P    PS++G PR     V   +K  YVGDEA    G+L +++PI+  I  NW D+  I+ + +  EL++   EHP+LLTE  L    +REK+ +++FE F+ P++ +A Q+ L+LY+ G  TG+ ++SG   T + PIYEG+ALP+A  +LD+ G  +T+YL + I++ +G+ F T++E+ ++  +K+ LCYVALD   +E         + +S+ LPDGQ ITIG ERF  PE +F PS +G+ +   + +T   S  + D D+R  L+ N ++SGG +   G   R++ E+    P+  +I  +   +    S W+GGS+LAS++ ++  WIS   Y E G +IVH+ CF
Sbjct:    7 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTTAEREIVRDIKEKLCYVALD-FEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES-CGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK-YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
The following BLAST results are available for this feature:
BLAST of TCONS_00016263-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACTG4.305e-8438.61Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1... [more]
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