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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00016262-protein ID=TCONS_00016262-protein|Name=TCONS_00016262-protein|organism=Clytia hemisphaerica|type=polypeptide|length=735bp
MIRTLMLGAVALDEMQLYSGERHASTDSGVFDDGQVVYDDSGRVVQNEVL
MKPGVEVYQSEEAELVYGQNGEITEIENNNNTIMTSSNEMILGSEGEETG
TPDESTDEAEGSPRSESESEVEIIDDDEEEIEESAEEIGESESESVEEES
EDENVDTRESIRSELQDLLAEEEAAMVKLTKEVELSALEEKRIANKLKDE
HVIKDAEENKHHMPNPAEGLLGMNGNGDVVLTTESDNEITNGAVENGHSS
AESETEEQLNGDAQTGEGEKVENEVAEPQEPEGVQEEVAMETAEETPSPK
PEETKEEVIEVKPRRSTRIKKAKKVNSDLFVEMNLKTNLLEGHHHDVCSV
DMFGKFILSAGRDTSLKLWDSSTNVELQSLGGHESTITKVLFATDQDFES
IPPALTASTDCSVRLWNLDEGKMTKSIYVYNTVTCMDYSHGNILIGTDGG
KMEVYELESGQQKFSANAFEGVAITEVKFLDDTKAVCGGANGVISIFNTN
PTGEGGKTLFTLDGDNVAVVSNTEANSEPSDATTTTSKLNMSKINCMAVF
EDLIVYGDNGYNIKILDYKKGEVTKIRNNLKEFCPTEALHIGQFQSSSYL
FSVGSDVDTGDAYVNIRSLPDLQYMGTIRDIETNSGSVTCFTQQDINNKL
HFVTGGAQLRLWNQVVRRGRKRKNSPNGDVAYVPCKYICNFTDPRDSEPE
TDDNETELESSGEQTGKSESSTERIPAGKSWCTIL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 124..151 |
| None | No IPR available | COILS | Coil | Coil | coord: 162..182 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 240..309 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 694..735 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 93..159 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 206..227 |
| IPR001680 | WD40 repeat | SMART | SM00320 | WD40_4 | coord: 530..567
e-value: 400.0
score: 0.6
coord: 373..417
e-value: 0.12
score: 21.5
coord: 423..456
e-value: 160.0
score: 3.0
coord: 459..498
e-value: 10.0
score: 10.7
coord: 333..370
e-value: 0.15
score: 21.2 |
| IPR001680 | WD40 repeat | PFAM | PF00400 | WD40 | coord: 377..417
e-value: 4.9E-4
score: 20.8
coord: 340..370
e-value: 0.0036
score: 18.0 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 380..426
score: 10.007 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 340..379
score: 10.709 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 418..725
e-value: 1.7E-19
score: 69.2 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 32..417
e-value: 4.6E-16
score: 58.4 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 404..418 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 357..371 |
| IPR017986 | WD40-repeat-containing domain | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 340..426
score: 17.376 |
| IPR017986 | WD40-repeat-containing domain | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 340..663 |
Blast
The following BLAST results are available for this feature:
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