TCONS_00016246-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00016246-protein
Unique Name	TCONS_00016246-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	338

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00016246-protein ID=TCONS_00016246-protein|Name=TCONS_00016246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=338bp
DMYRRRRRRKVLFACLILVSLLCFNMNLFIDVDNKIISPLKNFGQNMLRG
SKKHPFVMPENHTPNIKLLNYDDIDPFHGDIMFLVTSHIRFQIRRDSIRS
SWGDASRFTKHRLKYNGVNYKVYFQTGYLDGAFKAAKLESKIHRDMLISN
RTEDYWDLSRRVMLGFIWSLEHCSFEYLIKTDDDVFYNIPNLFQLIYEDP
FILAHKDRVFAGSIYQITRRSSRDLFSKWYVPKEEWPADEYPYFATGMAN
ILSRLVVERMRPHFDWVNPFRLDDVYIGMLVNRANVPRMGIRKIKVMNEE
FYGRGSAKKCFYLKHSITQHQVTKGWCMEGLTAKSVIT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009076	XLOC_009076	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00016246	TCONS_00016246	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002659	Glyco_trans_31

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008378	galactosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006486	protein glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0008378	galactosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002659	Glycosyl transferase, family 31	PFAM	PF01762	Galactosyl_T	coord: 94..288 e-value: 4.1E-30 score: 105.0

Blast

[Close]

BLAST of TCONS_00016246-protein vs. Swiss-Prot (Human)
Match: B3GT5 (Beta-1,3-galactosyltransferase 5 OS=Homo sapiens GN=B3GALT5 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.963e-20
Identity = 70/282 (24.82%), Postives = 133/282 (47.16%), Query Frame = 0

Query:    8 RRKVLFACLILVSLLCFNMNLFIDVDNKIISPLKNFGQNMLRGSKKHPFVMPENHTPNIKLLNYDDIDPFHGDIMFLVTSHIRFQIRRDSIRSSWGDASRFTKHRLKYNGVNYKVYFQTGYLDGAFKAAKL--ESKIHRDMLISNRTEDYWDLSRRVMLGFIWSLEHC-SFEYLIKTDDDVFYNIPNLFQLIYEDPFILAHKDRVFAGSIYQITRRSSRDLFSKWYVPKEEWPADEYPYFATGMANILSRLVVERMRPHFDWVNPFRLDDVYIGMLVNRANV 286
            + ++++ CL+++  LC   +++       ++P K   Q+ +     +   +P+         +     PF   ++ LVTS  +    R +IR +WG      K R+   G   K +F  G    A +  ++  ES+ H D++  +  + Y++L+ + M+G  W    C    +++KTD D+F N+  L +L+ +         R F G + ++     R  FSKW+V K E+P D YP F +G   + S  V  ++      V   +L+DV++G+ + R N+
Sbjct:    5 KMRLMYICLLVLGALCLYFSMYS------LNPFKE--QSFVYKKDGNFLKLPDT--------DCRQTPPF---LVLLVTSSHKQLAERMAIRQTWG------KERM-VKGKQLKTFFLLGTTSSAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKK----NRTTRFFTGFL-KLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNI 255

The following BLAST results are available for this feature:

BLAST of TCONS_00016246-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00016246-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
B3GT5	1.963e-20	24.82	Beta-1,3-galactosyltransferase 5 OS=Homo sapiens G...	[more]

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TCONS_00016246-protein (polypeptide) - C. hemisphaerica