TCONS_00016236-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016236-protein
Unique NameTCONS_00016236-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length278

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016236-protein ID=TCONS_00016236-protein|Name=TCONS_00016236-protein|organism=Clytia hemisphaerica|type=polypeptide|length=278bp
ALQDFFKYLKGIMSLSPEMKYWLSSHYILNTIACTIYMLTKTVHPVCISL
FELDENGNCQLDYRDTEVLFFLAMVIVLKNRKWKPLTAVEYVSNIYLFAK
LANLLLFFRQDLRWGALYAIVCLLLFIAFPEPSYTGPEKITYFRGQALDE
QILHHPEETWIIEFFAPWSPPCNRFASTFANLSLKYDHPLLKFGKLDINK
YEKVGQKHRVDVSVSSKNLPTIIVFENGKEISRQPTVNPDGSIKAYQFKE
ENLIRDLDLNDLYARAKQRATDRNKKKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009067XLOC_009067Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016236TCONS_00016236Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 146..236
e-value: 1.0E-11
score: 44.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 125..271
score: 10.543
NoneNo IPR availableGENE3D3.40.30.10coord: 130..278
e-value: 5.4E-19
score: 68.1
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 138..239

Blast
[Close]
BLAST of TCONS_00016236-protein vs. Swiss-Prot (Human)
Match: TMX2 (Thioredoxin-related transmembrane protein 2 OS=Homo sapiens GN=TMX2 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.197e-71
Identity = 101/254 (39.76%), Postives = 164/254 (64.57%), Query Frame = 0 
Query:   17 PEMKYWLSS-HYILNTIACTIYMLTKTVHPVCISLFELDENGN-CQLDYRDTEVLFFLAMVIVLKNRKWKPLTAVEYVSNIYLFAKLANLLLFFRQDLRWGALYAIVCLLLFIAFPEPSYTGPEKITYFRGQALDEQILHHPEETWIIEFFAPWSPPCNRFASTFANLSLKYDHPLLKFGKLDINKYEKVGQKHRVDVSVSSKNLPTIIVFENGKEISRQPTVNPDGSIKAYQFKEENLIRDLDLNDLYARAKQ 268
            P +  WL+  +Y+L+ +    ++L + + P+C  L    E+GN C  D+R+ E+L FL+ ++++KNR+   +T  +++ NI++F+K+AN +LFFR D+R G LY  +C++  +    P Y GPE I YF  + +DE++      TWI+EFFA WS  C  FA  +A+LSLKY+   L FGK+D+ +Y  V  +++V  S  +K LPT+I+F+ GKE  R+P ++  G   ++ F EEN+IR+ +LN+LY RAK+
Sbjct:   15 PRLSRWLAQPYYLLSALLSAAFLLVRKLPPLCHGLPTQREDGNPCDFDWREVEILMFLSAIVMMKNRR--SITVEQHIGNIFMFSKVANTILFFRLDIRMGLLYITLCIVFLMTCKPPLYMGPEYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSEENVIREFNLNELYQRAKK 266
The following BLAST results are available for this feature:
BLAST of TCONS_00016236-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMX29.197e-7139.76Thioredoxin-related transmembrane protein 2 OS=Hom... [more]
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