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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00016227-protein ID=TCONS_00016227-protein|Name=TCONS_00016227-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1641bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00016227-protein vs. Swiss-Prot (Human)
Match: LRP4 (Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens GN=LRP4 PE=1 SV=4) HSP 1 Score: 252.677 bits (644), Expect = 1.572e-67 Identity = 168/573 (29.32%), Postives = 286/573 (49.91%), Query Frame = 0
Query: 132 SLEIDSHNKK--VFWGDFRYHTINCSDLDGGNRKSVLTYAIGYAQGISADWTSNNVYWTDSLMHLVEVADYEGKHRKVLFALDKESEPRGILANPKSRHLFWTDWGKEPKIERSTLHGTDRVAIVTKNLTWPNDLAIDHTSERLYWVDAKYDYLYSVDYDGKNMKLHYELMFNQGIVHPYSLAYSTKNHAIYLSDWQTDRVYVDTLMDGHNVTSVFQNRGKQKNIGQIRLH---EDYTDAGITKPCATNR-------CSHMCFNAGQTYKCGCPTGWELSSDDEVCVESKRSYEIYFADSFANTVN-HLVKYEGQD-GFSIKPLPNITHEGLQSPLALDFDSTPDSRYVYWADHKKEKVYRMHENGGKFETLITGQVT--YGLAIDKINKLLYWFKDNKDLVVSSVTGEDIKT--MFAGLHSPRDIALYEEKGLIFFNDHYDG-RIYRINADGTGLKSYKSTRKTAITGIAVDKIENRLYWCDSESYSIQSIDISLVSSTRKLVVQKTTYFYGRFWLVTQDSHVVEPFDLSISGDQMFWTDTYKRAIFSADKRSGGRIDYVTGGLDHPRDLHV 685
++ +D H+++ VFW D I ++L+G N + V++ + G++ DW + +YWTDS +EVA+ +G HRKVL + E +PR I +P ++WTDWG P+IE S++ G+ R I +L WPN L ID+ R+YWVDAK+ + + DG H + + +QG+ HP+ A + ++Y +DW T ++ S + GK + I + +LH + +T +P NR C+H+C +GQ Y C CPTG+ S C +S + + FA ++ + ++ +D + PL ++ +S +ALD+DS D +VYW D + + R +G E ++ + GLAID + LYW D + + T ++T ++ L PRDI + G +++ D +I R D +G + S+ T G+A+D RLYW D+ +I+ L S RK+++ S + PF L++ G++++WTD ++I SAD+ +G + + L++ D+HV
Sbjct: 470 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLE-KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS----HRKAVISQGLPHPF--AITVFEDSLYWTDWHT-----------KSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQNYTCACPTGFRKIS-SHACAQSLDKFLL-----FARRMDIRRISFDTEDLSDDVIPLADV-----RSAVALDWDSRDD--HVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEF--AGLDGSKRKVLIG---------------SQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHV 994 HSP 2 Score: 245.358 bits (625), Expect = 3.177e-65 Identity = 165/565 (29.20%), Postives = 273/565 (48.32%), Query Frame = 0
Query: 132 SLEIDSHNKKVFWGDFRYHTINCSDLDGGNRKSVLTYAIGYAQGISADWTSNNVYWTDSLMHLVEVADYEGKHRKVLFALDKESEPRGILANPKSRHLFWTDWGKEPKIERSTLHGTDRVAIVTKNLTWPNDLAIDHTSERLYWVDAKYDYLYSVDYDGKNMKLHYELMFNQGIVHPYSLAYSTKNHAIYLSDWQTDRVYVDTLMDGHNVTSVFQNRGKQKNIGQIRLHEDYTDAGITKPCATNR--CSHMCFNAGQ--TYKCGCPTGWELSSDDEVCVESKRSYEIYFADSFANTVNHLVKYEGQDGFSIKPLP-NITHEGLQSPLALDFDSTPDSRYVYWADHKKEKVYRMHENGGKFETLITG--QVTYGLAIDKINKLLYWFKDNKDLV-VSSVTGEDIKTM-FAGLHSPRDIALYEEKGLIFFNDH-YDGRIYRINADGTGLKSYKSTRKTAITGIAVDKIENRLYWCDSESYSIQSIDISLVSSTRKLVVQKTTYFYGRFWLVTQDSHVVEPFDLSISGDQMFWTDTYKRAIFSADKRSGGRIDYVTGGLDHPRDLHVV 686
+L+ DS + V+W D TI+ + DG ++ V+ ++ G++ DW +N +YWTD+ +EVA+ +G R VL + PR I+ P +++WTDWG PKIER+ + + R I++ NLTWPN LAID+ S+RLYW DA + DG K ++ + HP+ L + IY +DWQT + + G + ++ +N +N+ I + ++ PCA CSH+C + + C CPTG L SD + C S+ I+ V+ + Y F+ +P NIT +++ +A+ D P VYW+D ++ R + +G + E +IT Q T GLA+D I + +YW + + V ++ G K + + L SPR I LY E G +++ D + ++ R DG+ + G+ VDK ++L W D+ + I++ D++ + R +V S V P+ L++ ++WTD R+I ADK +G + V L D+ V
Sbjct: 777 ALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLI-WENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRK----VLIGSQLPHPFGL--TLYGERIYWTDWQTKSIQSADRLTGLDRETLQEN---LENLMDIHVFHRRRPP-VSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARRIDIRMVSLDIPY-----FADVVVPINIT---MKNTIAIGVD--PQEGKVYWSDSTLHRISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLN--GANRHTLV----------------SPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRSNLPGLMDMQAV 1302 HSP 3 Score: 232.261 bits (591), Expect = 3.154e-61 Identity = 162/562 (28.83%), Postives = 266/562 (47.33%), Query Frame = 0
Query: 132 SLEIDSHNKKVFWGDFRYHTINCSDLDGGNRKSVLTYAIGYAQGISADWTSNNVYWTDSLMHLVEVADYEGKHRKVLFALDKESEPRGILANPKSRHLFWTDWGKEPKIERSTLHGTDRVAIVTKNLTWPNDLAIDHTSERLYWVDAKYDYLYSVDYDGKNMKLHYELMFNQGIVHPYSLAYSTKNHAIYLSDWQTDRVYVDTLMDGHNVTSVFQNRGKQKNIGQIRLHEDYTDAGITKPCATNR-CSHMCFNAGQTYKCGCPTGWELSSDDEVCVESKRSYEIYFADSFANTVNHLVKYEGQDGFSIK-PLPNITHEGLQSPLALDFDSTPDSRYVYWADHKKEKVYRMHENGGKFETLITG--QVTYGLAIDKINKLLYWFKDNKDLV-VSSVTGEDIKTMF-AGLHSPRDIALYEEKGLIFFNDH-YDGRIYRINADGTGLKSYKSTRKTAITGIAVDKIENRLYWCDSESYSIQSIDISLVSSTRKLVVQKTTYFYGRFWLVTQDSHVVEPFDLSISGDQMFWTDTYKRAIFSADKRSGGRIDYVTGGLDHPRDLHVV 686
++ +D KV+W D H I+ ++LDG + ++T + G++ D VYWTD+ + +EV + +G RKVL + +S PR I+ + ++WTDWG+ K+ERS + G+DR ++ NL WPN L +D S +L W DA + + + D +G N + HPY L + + IY +DWQT ++ G NV V R + ++ + G K + N CSH+C + C CPTG +L D + C S +Y ++ S ++ + + D + P+P L + ++LD+DS VY+ D + + R NG ET+I + T GLA+D + + LYW ++ + S + G K + L PR IA++ KG +F+ D + +I R N DG+ K +T G+ +D R+YW D+ I+S D++ R+++V SHV PF L+ ++WTD ++I DK SG + V ++ D+ VV
Sbjct: 1085 AIGVDPQEGKVYWSDSTLHRISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDS-PRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRH-----TLVSPVQHPYGL--TLLDSYIYWTDWQTRSIHRADKGTGSNVILV---RSNLPGLMDMQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLF---SSRGSIRR-ISLDTSDHTDVHVPVPE-----LNNVISLDYDSVDGK--VYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLN--GKLRQVLV----------------SHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVV 1606 HSP 4 Score: 162.155 bits (409), Expect = 9.315e-40 Identity = 89/269 (33.09%), Postives = 140/269 (52.04%), Query Frame = 0
Query: 129 HIRSLEIDSHNKKVFWGDFRYHTINCSDLDGGNRKSVLTYAIGYAQGISADWTSNNVYWTDSLMHLVEVADYEGKHRKVLF--ALDKESEPRGILANPKSRHLFWTDWGKEPKIERSTLHGTDRVAIVTKNLTWPNDLAIDHTSERLYWVDAKYDYLYSVDYDGKNMKLHYELMFNQGIVHPYSLAYSTKNHAIYLSDWQTDRVYVDTLMDGHNVTSVFQNRGKQKNIGQIRLHEDYTDAGITKPCATNR--CSHMCFNAGQTYKCGCP 393
++ SL+ DS + KV++ D I +DL+G N ++V+ + G++ DW + N+YWTD+ + +E + +G RKVL +LD EPR I P+ +LFWTDWG KIER+ L G++R ++ +L WPN L +D+ + R+YWVDA D + S D +GK + + HP++L + ++ IY +DWQT + G N +V N +I + T C N C+H+CF + C CP
Sbjct: 1386 NVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLD---EPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGK-----LRQVLVSHVSHPFAL--TQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSPQRQTG----TNACGVNNGGCTHLCFARASDFVCACP 1640 HSP 5 Score: 109.768 bits (273), Expect = 8.226e-24 Identity = 85/337 (25.22%), Postives = 151/337 (44.81%), Query Frame = 0
Query: 358 RLHEDYTDAGITKPCAT-NRCSHMCFNAGQTYKCGCPTGWELSSDDEVCVESKRSYEIYFAD--SFANTVNHLVKYEGQDGFSIKPLPNITHEGLQSPLALDFDSTPDSRYVYWADHKKEKVYRMHENGGKFETLITGQVTY--GLAIDKINKLLYWFKDNKDLV-VSSVTGEDIKTM-FAGLHSPRDIALYEEKGLIFFNDHYDG-RIYRINADGTGLKSYKSTRKTAITGIAVDKIENRLYWCDSESYSIQSIDISLVSSTRKLVVQKTTYFYGRFWLVTQDSHVVEPFDLSISGDQMFWTDTYKRAIFSADKRSGGRIDYVTGGLDHPRDLHVV 686
RL ED CA CS C N+ ++C C TG+EL D C + FA+ + H +Y + L++ +ALDF + V+W+D +++ R + NG E +++ + GLA+D ++ LYW + V+++ G K + + L PR IAL+ +G I++ D + RI + DG+G + T G+ +D R+YW D++ + I+ ++ S RK V+ + + PF +++ D ++WTD + ++I SA+K +G + + L P D+H +
Sbjct: 385 RLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEY------------TLLLNNLENAIALDFHHRRE--LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--GSHRKAVISQG---------------LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTL 690 The following BLAST results are available for this feature:
BLAST of TCONS_00016227-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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