TCONS_00016219-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016219-protein
Unique NameTCONS_00016219-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length656

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016219-protein ID=TCONS_00016219-protein|Name=TCONS_00016219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=656bp
VEVSRLLSDKLKPKMKGTGSRNEDPEIEEILESKLDDQSGERYYKIQWKT
SWLSEESLKQYQQQIEEFWSKQLQHSEVDIQQIQPIEQQPKLDSQQIDLN
SLRIELNNNQIEQQPNKSSKVEFNEHQIDLQDQQIVHHSPQSEIDDQQTD
EEDEINVEVVDGLDVDCLSLTKDINKVDDIELSPDTTLTQIESEGDDSSE
EGITSEDESDFEEMTSSGGAANNDQQSPNKRKCSWNLEDIVLKLKRSKKP
SSLPQSPLPPEDIKHEEDDYVLSPVFPREMNDSEKSFLSEKSIFLTQLEQ
KDNISLMQNIREERKILDVSETSNDGSLSSGASADERDXLNETSNDGSLS
SGASADERDEPEQKPERSASKKADDLIRGDFQLAKLLEEEKLLGSEGDKI
DETKCNKCNKRFYRRSQLIRHLSNHVVHECLQCSAVFYCVKKYKKHMNTH
ETYPCDFCNEEFYDASAWYKHRAKHTMMECSCCDMIFYNKTALAKHKFEH
SEYICPLCRFASENLHHWISHRNYHGRCSLLQPIIACRECKLTFGSQEVF
LKHKCSKPPKSITLNKPLQPKILTPKNLPPKMLTPNILTPKTSLPPLSST
KIPKSIPMSVHSQHSRISKPYDRRPTIPPTKSFFKDHLSRDKRFMPMTKN
SKHSAH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009061XLOC_009061Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016219TCONS_00016219Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR016197Chromodomain-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..112
NoneNo IPR availableGENE3D2.40.50.40coord: 15..74
e-value: 7.4E-6
score: 25.1
NoneNo IPR availableGENE3D3.30.160.60coord: 364..413
e-value: 6.0E-5
score: 22.7
NoneNo IPR availableGENE3D3.30.160.60coord: 465..489
e-value: 7.8E-5
score: 22.5
NoneNo IPR availableGENE3D3.30.160.60coord: 440..464
e-value: 1.7E-6
score: 27.6
coord: 490..513
e-value: 0.048
score: 13.3
NoneNo IPR availableGENE3D3.30.160.60coord: 514..618
e-value: 0.076
score: 12.6
NoneNo IPR availableGENE3D2.20.28.30coord: 414..439
e-value: 1.5E-5
score: 24.7
NoneNo IPR availableCDDcd00024CHROMOcoord: 23..71
e-value: 7.70125E-6
score: 43.0215
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 428..450
e-value: 5.6
score: 15.5
coord: 478..500
e-value: 6.2
score: 15.1
coord: 403..425
e-value: 0.01
score: 25.0
coord: 503..525
e-value: 5.4
score: 15.7
coord: 453..475
e-value: 0.073
score: 22.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 430..450
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 405..425
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 480..500
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 455..475
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 403..425
score: 10.471
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 453..476
score: 8.787
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 452..500
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 404..450
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 22..72

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016219-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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