|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00016044-protein ID=TCONS_00016044-protein|Name=TCONS_00016044-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1009bp
MPWKRTGSKEKKKNSGSLSDTEIDIDKRSKNRKEDYAEVVLPSTKPVKTK
TSIATQKKTSTPQTDKKTTKTKVVKTSDEKPPKTSKPIEPKLPKKVVRAT
KSTDNVRSESATSTPSRTKKLSKKDKKEQSNLTTVSRKPTKEDTEVLTPI
IDCKSLSKDELLSILRSANEVTPTCLKVNIINNYTPQKNKENTELIVRKG
DIVYLQYVLDGNCLVKNKKGKSGFVPFSSTSSSLALVDSTPKTRRRLFGN
KQQKKNSVDELEEKPIEKPVRKQRSISFDLPPENPPRKAAAVEPTDTVAT
RTESGSPTITKRAPVHYFAEGTSNEHKAFVASGRSKSYDQILKPISAAIG
SKKKNRKEKDDFIAPLRQTKTRAASVNVSDEFDFQRPATALDRYRASSFD
TVDPADLQRPATALGGRRLSNSSTSGFSETSRGSIDRILSPITQRKLKDF
SNSDRDMNKLKAFSRKITSKGSLKDKNTRKTSSSSRMSDSELSSSSYSSS
IVKVNNKRNGSKTSLNKHKRTNSLSDHYQVNWYKDWNIEPSDSSDSEDES
CNTTDTESIQLKVKKVTKTEDRSFSDYETRTGTNRLRYRRTSADISASSD
VYVAKSKQIMLRETNNNERSTNLSGFAQVYKTKTAMQKTKSSSSDALLDG
STNRDHEMEQKIKELKKHRLSNSNSSLNSIQKNVKPMSHDNGNNQDELLS
PLVPQKVTGDSQQSVSDILLGKSIQKNTSNDSIKKQTNFVDNVEKETTFV
EKIERHNNSIDNVMIVKSDFIAQEENYVTILTCQHVTVLDPSDGEWWWIR
NPSGKEGFVPKDFLMEKPKIPKRKPDASKVKRTSSPTENDLNNNSGILRK
TTTTGNQQPTPLAKVAPLMRVDIPQQPQEDFSLYKKPISSQSDSPPLPSY
NQYMMRRQKSDLTDRYYNNNGDYSDNEKIRRTADPGGAARVVRRRSFSGR
QKKVRFANDVQSGDESSSGPRYQNSPGQILIVRQPTAGGTAHVEFAKDNE
TEVEIATWC Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001452 | SH3_domain |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 244..264 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 789..964
e-value: 1.2E-6
score: 27.6 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 752..788
e-value: 0.0096
score: 14.9 |
| None | No IPR available | GENE3D | 2.30.30.40 | | coord: 155..231
e-value: 5.5E-4
score: 19.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 463..521 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..140 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 914..939 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 407..432 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 248..308 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 819..860 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 636..694 |
| None | No IPR available | CDD | cd00174 | SH3 | coord: 183..228
e-value: 0.00213872
score: 36.2867 |
| IPR001452 | SH3 domain | SMART | SM00326 | SH3_2 | coord: 762..818
e-value: 7.0E-5
score: 32.2
coord: 176..238
e-value: 1.9
score: 6.3 |
| IPR001452 | SH3 domain | PROSITE | PS50002 | SH3 | coord: 759..819
score: 10.486 |
| IPR001452 | SH3 domain | SUPERFAMILY | 50044 | SH3-domain | coord: 175..228 |
| IPR001452 | SH3 domain | SUPERFAMILY | 50044 | SH3-domain | coord: 763..836 |
Blast
The following BLAST results are available for this feature:
|
