TCONS_00016037-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016037-protein
Unique NameTCONS_00016037-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length432

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016037-protein ID=TCONS_00016037-protein|Name=TCONS_00016037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=432bp
XENWWSKPRKRFPYLGRPEKFKALLTTASYDLYTEWGTIIANTSDNKIPA
RWIYPDMTSPGSIWYWLNENDCNLDYGKVDGGLTSWSTWSKCSTFCGQGT
QSRNRLCINPIPKCGGDDCDVTKTTEETRQCTGSCYESQIVTHDNSFCLE
PVTGGCNPPDNTNIHFRPKSTKCNDEESKFIFDPDSGKLVHKCSQKPVCV
KDGNTGYGTKLVVSSTCPEPSPTLRLSRTYYDTVQFGVLCLDPTGGQAAD
KVQVLIWSVCTLPGRRLLFPSIAKGKVKVSKYDFTTTTMQDVFDHPSYPN
SPTRTGRIDNLDLTKNIGSNYAARLQTYFLAPESGNFDFVASCDDECEVF
LSTDDKESNKQKIISVSDYTNYQQWDKDAEQKSGPIQLESGKKYYMEAVM
REAAGSDNLSVGVYQPNGVSLLPITSHYLDEY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008962XLOC_008962Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016037TCONS_00016037Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR011658PA14_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 83..136
e-value: 5.9E-9
score: 45.7
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 85..133
e-value: 1.5E-6
score: 28.2
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 79..130
e-value: 2.3E-12
score: 46.5
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 80..136
score: 11.817
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 79..132
NoneNo IPR availableGENE3D2.60.120.380coord: 310..419
e-value: 1.8E-17
score: 62.9
NoneNo IPR availableGENE3D2.80.10.50coord: 131..264
e-value: 0.0013
score: 18.7
IPR011658PA14 domainPFAMPF07691PA14coord: 319..418
e-value: 1.1E-6
score: 28.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016037-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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