TCONS_00015985-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015985-protein
Unique NameTCONS_00015985-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1602

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015985-protein ID=TCONS_00015985-protein|Name=TCONS_00015985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1602bp
MGKRLHIIFSILYIGLICCVAVQGAAPEITTPSQEKTRLTHKTGDQLQFQ
CVAESSPTATLKWYLKDKIIDSQQDGLTITSNTIEEQDKNKTTSTLKIET
LDLDNRGEYKCEASNADGSVERLYDVAIFELSFVTKPDNEYVIPAGNVLR
IDSTVRGHPKPIASWKLNNVHVRALNNTRIYHIERLSPDNYTLNSALIIN
NATARDTGNVSVVFHYMMGSISTSSFLTVLDFKLALEASDLSKNSATINI
NNHKFDEKSTHPGYSIELILYSIKSGQTTEIKRQNLGDNPPSWALDSLEA
GTQYNVSGQEKVGTFAGDVIGITFTTEEDTPSAPENVIVTEVQSTSFVVA
WDTPKMPNGNITNYEVVYKNNGSSTSETSTVSGENSQIMVPNLAPDTVYF
IKVQASTLVGSGPYSEQLTVRTPIEMGNLKISTFKTGNDSAQLRLSDHQF
AKQSPDYFVVLKLYSIISNVESEVRNLTLNEIASDSLVNLTNLMPYTTYK
VTGQENSGEHKVITATTTFTTTQSAPSAPVNIQAKSISANYFIITWEKPL
KPNGIIRQYEIRYSFYDGANTVEETVSISDTDTLEKKLDGLYSFVKYTVE
IRAQTVDFGPYNSSEVTTLESQPGAPSKVTVEDVNGTNIIVRWEPLPPYQ
RGGVLTYYKITYKTYQKDENYKTVSPDKSSIELSGLSAYKGYEIKVQALT
ENHQGKITAVTHKTLEAAPSVPNEITIKMNRQISNNEKGHVAIHTALVSW
KEPTDLNGVITAYQIRWWKDAYCVGDDNPCNFTQTDKKRRRRSTLNFRYI
LVNLTVSNKPKDRERRVTIDGLLAYTKYGFNVQEKTKAGWGPYSKELFGS
SSAGNPSKPEILTNYTAAHDAITFSWRSPNRPNGIIGSYSIKLYTIDRLT
KELTIIKYFPLNEIHTTSIKDLEAEKRYEIELAAQVNVNNDRLRGDSARF
QFTTDVAPAGFPWHYILIACLAVILLIAMVIAIFLLVGRRRDRYEEVRQG
DQFDMTAINKSKVIRTSELQAYVGQQLANSDHGIQTEYESVRIPVHSFTW
ENSQMSGNLSKNRYGNIVAYDHSRVMLNQIDNDPYSTYINANFINGYQQQ
KKFIAAQGPLPETVLDFWRMVWEQNTATIVMLTRLVEDNKVKCEQYWPEG
KALQYGSIVVTVNSVSEMTDYTVRVFTLHKVNSPEMGKREVRQYHYMSWP
DHGVPGHPTSMLSFVRHVMGDMKNRRQEGPVVVHCSAGVGRTGTFIAIET
GLRQIEHDQTVDIYGTVCRMRMQRNFMVQIEGQYKFIYVSLLDSVICGNT
EIEPSELVGKIRYLNLVDPKTGKTNFHEEFKRLETGMTSTDYTHSDAGHT
ENKQKNRYLNILPYDHNRVKLMPIAGSRSSDYINASMIDGFQQKNAFIAT
QAPLENTVIDFWRMIQEKNVHTIVMLTKLVERDQDKCYLYWPQAGTVSYG
ATHVEMENIRQEDENIIVHDLRISNRETGKSWQIKHFMYTGWPDSGSPTT
GTEFINLIGSIQRTQLSVQSGGPTLVHCSGGVGRTGVFITVYNTIDKLRS
NNVIDIFHTIRQLRLQRVAMCQTLDQYIFCHNALKDYLDSFDLYANPQAL
AC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008928XLOC_008928Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015985TCONS_00015985Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000242PTPase_domain
IPR003595Tyr_Pase_cat
IPR003599Ig_sub
IPR003598Ig_sub2
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR029021Prot-tyrosine_phosphatase-like
IPR013098Ig_I-set
IPR016130Tyr_Pase_AS
IPR000387TYR_PHOSPHATASE_dom
IPR007110Ig-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0016311dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004725protein tyrosine phosphatase activity
GO:0005515protein binding
GO:0016791phosphatase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0006470 protein dephosphorylation
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004725 protein tyrosine phosphatase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000242PTP type protein phosphatasePRINTSPR00700PRTYPHPHTASEcoord: 1230..1248
score: 75.48
coord: 1103..1123
score: 67.48
coord: 1189..1206
score: 52.68
coord: 1261..1276
score: 40.85
coord: 1277..1287
score: 56.04
coord: 1087..1094
score: 67.28
IPR000242PTP type protein phosphataseSMARTSM00194PTPc_3coord: 1033..1296
e-value: 4.0E-119
score: 411.7
coord: 1325..1589
e-value: 8.1E-97
score: 337.6
IPR000242PTP type protein phosphatasePFAMPF00102Y_phosphatasecoord: 1352..1584
e-value: 1.3E-75
score: 253.9
coord: 1058..1292
e-value: 2.1E-83
score: 279.4
IPR000242PTP type protein phosphatasePROSITEPS50055TYR_PHOSPHATASE_PTPcoord: 1034..1294
score: 56.847
IPR000242PTP type protein phosphatasePROSITEPS50055TYR_PHOSPHATASE_PTPcoord: 1326..1587
score: 52.684
IPR003595Protein-tyrosine phosphatase, catalyticSMARTSM00404ptp_7coord: 1190..1293
e-value: 1.6E-41
score: 153.9
coord: 1483..1586
e-value: 2.0E-31
score: 120.4
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 138..230
e-value: 10.0
score: 11.5
coord: 36..129
e-value: 0.0011
score: 28.3
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 42..118
e-value: 5.2E-10
score: 49.3
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 730..841
e-value: 0.014
score: 24.6
coord: 230..319
e-value: 160.0
score: 1.1
coord: 623..705
e-value: 4.4E-10
score: 49.5
coord: 856..942
e-value: 0.26
score: 20.3
coord: 331..412
e-value: 2.5E-12
score: 57.0
coord: 526..611
e-value: 1.0E-6
score: 38.3
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 745..844
e-value: 1.4E-7
score: 31.6
coord: 625..706
e-value: 1.4E-14
score: 54.0
coord: 527..607
e-value: 2.2E-9
score: 37.4
coord: 332..415
e-value: 8.1E-17
score: 61.3
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 528..624
score: 18.746
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 732..854
score: 8.49
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 625..720
score: 17.87
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 333..425
score: 24.568
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 855..959
score: 12.884
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 232..329
score: 6.675
IPR003961Fibronectin type IIICDDcd00063FN3coord: 744..844
e-value: 2.98721E-6
score: 45.9503
IPR003961Fibronectin type IIICDDcd00063FN3coord: 526..618
e-value: 1.12622E-10
score: 59.4323
IPR003961Fibronectin type IIICDDcd00063FN3coord: 331..422
e-value: 2.45461E-17
score: 79.0775
IPR003961Fibronectin type IIICDDcd00063FN3coord: 856..954
e-value: 0.00141549
score: 37.8611
IPR003961Fibronectin type IIICDDcd00063FN3coord: 623..714
e-value: 1.54414E-11
score: 62.1287
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 483..607
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 745..775
coord: 812..935
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 236..424
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 622..769
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 854..958
e-value: 5.4E-8
score: 32.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 616..716
e-value: 3.0E-20
score: 71.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 527..614
e-value: 2.5E-16
score: 59.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 129..233
e-value: 8.2E-8
score: 31.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 333..430
e-value: 3.1E-26
score: 91.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 717..853
e-value: 2.0E-14
score: 53.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 262..332
e-value: 0.055
score: 13.3
coord: 463..526
e-value: 0.005
score: 16.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 25..128
e-value: 2.6E-16
score: 59.3
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 1006..1298
e-value: 2.5E-110
score: 367.7
coord: 1299..1592
e-value: 1.2E-97
score: 326.1
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 1312..1594
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 1012..1293
NoneNo IPR availablePFAMPF13927Ig_3coord: 27..115
e-value: 4.6E-12
score: 46.3
NoneNo IPR availableCDDcd00096Igcoord: 47..122
e-value: 7.4792E-8
score: 50.5655
NoneNo IPR availableCDDcd00047PTPccoord: 1355..1584
e-value: 1.01069E-93
score: 302.583
NoneNo IPR availableCDDcd00047PTPccoord: 1061..1293
e-value: 7.31688E-113
score: 355.74
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 133..229
e-value: 3.3E-5
score: 23.8
IPR016130Protein-tyrosine phosphatase, active sitePROSITEPS00383TYR_PHOSPHATASE_1coord: 1526..1536
IPR016130Protein-tyrosine phosphatase, active sitePROSITEPS00383TYR_PHOSPHATASE_1coord: 1233..1243
IPR000387Tyrosine specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 1209..1285
score: 19.355
IPR000387Tyrosine specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 1502..1578
score: 19.604
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 27..127
score: 12.35
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 27..125
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 133..232

Blast
BLAST of TCONS_00015985-protein vs. Swiss-Prot (Human)
Match: PTPRF (Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens GN=PTPRF PE=1 SV=2)

HSP 1 Score: 559.681 bits (1441), Expect = 2.561e-169
Identity = 281/571 (49.21%), Postives = 364/571 (63.75%), Query Frame = 0
Query: 1028 ANSDHGIQTEYESVRIPVHSFTWENSQMSGNLSKNRYGNIVAYDHSRVMLNQIDNDPYSTYINANFINGYQQQKKFIAAQGPLPETVLDFWRMVWEQNTATIVMLTRLVEDNKVKCEQYWPEGKALQYGSIVVTVNSVSEMTDYTVRVFTLHKVNSPEMGKREVRQYHYMSWPDHGVPGHPTSMLSFVRHVMGDMKNRRQEGPVVVHCSAGVGRTGTFIAIETGLRQIEHDQTVDIYGTVCRMRMQRNFMVQIEGQYKFIYVSLLDSVICGNTEIEPSELVGKIRYLNLVDPKTGKTNFHEEFKRLETGMTSTDYTHSDAGHTENKQKNRYLNILPYDHNRVKLMPIAGSRSSDYINASMIDGFQQKNAFIATQAPLENTVIDFWRMIQEKNVHTIVMLTKLVERDQDKCYLYWPQAGTVSYGATHVEME---NIRQEDENIIVHDLRISNRETGKSWQIKHFMYTGWPDSGSPTTGTEFINLIGSIQRTQLSVQSGGPTLVHCSGGVGRTGVFITVYNTIDKLRSNNVIDIFHTIRQLRLQRVAMCQTLDQYIFCHNALKDYLDSFDLYA 1595
            AN       EYES+  P   FTWENS +  N  KNRY N++AYDHSRV+L  ID  P S YINAN+I+GY++Q  +IA QGPLPET+ DFWRMVWEQ TAT+VM+TRL E ++VKC+QYWP       G I VT+    E+  YTVR F LHK  S E  KRE+RQ+ +M+WPDHGVP +PT +L+F+R V     N    GP+VVHCSAGVGRTG FI I+  L +++H++TVDIYG V  MR QRN+MVQ E QY FI+ +LL++  CG+TE+    L   I+ L  V P    T    EFK L +    T    S A    NK KNR +NI+PY+  RV L PI G   SDYINAS +DG++Q+ A+IATQ PL  +  DFWRM+ E N   IVMLTKL E  ++KC+ YWP   +  Y    V+     N+ Q     I+ + ++++   G+S  I+ F +T WP+ G P TG  FI+ IG + +T+      GP  VHCS GVGRTGVFIT+   ++++R   V+D+F T++ LR QR AM QT DQY  C+ A  +YL SFD YA
Sbjct: 1346 ANDGLKFSQEYESID-PGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVELATYTVRTFALHKSGSSE--KRELRQFQFMAWPDHGVPEYPTPILAFLRRVKA--CNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFIS-ANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQ----YILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYA 1906          

HSP 2 Score: 137.887 bits (346), Expect = 2.433e-32
Identity = 191/839 (22.77%), Postives = 328/839 (39.09%), Query Frame = 0
Query:   51 CVAESSPTATLKWYLKDKIIDSQQDGLTITSNTIEEQDKNKTTSTLKIETLDLDNRGEYKCEASNADG----SVERLY-DVAIFELSFVTKPDNEYVIPAGNVLRIDSTVRGHPKPIASWKLNNVHVRALNNTRIYHIERLSPDNYTLNSALIINNATARDTGNVSVVFHYMMGSISTSSFLTVLDFKLALEASDLSKNSATININNHKFDEKSTHPGYSIELILYSIKSGQTTEIKRQNLGDNPPSWALDSLEAGTQYNVSGQEKVGTFAGDVIGIT------------FTTEEDTPSAPENVIVTEVQSTS-FVVAWDTPKMPNGNITNYEVVYKNNGSSTSETSTVSGENSQIM--VPNLAPDTVYFIKVQASTLVGSGPYSEQLTVRT----PIEMGNLKISTFKTGNDSAQLRLSDHQFAKQSPDYFVVLKLYSIISNVESEVRNLTLNEIASDSLVNLTNLMPYTTYK--VTGQENSGEHKVITATTTFTTTQSAPSAPVN-IQAKSISANYFIITWEKPLKP--NGIIRQYEIRYSFYDGANTVEETVSISDTDTLEKKLDGLYSFVKYTVEIRAQTVDFGPYNSSE---VTTLESQP-GAPSKVTVEDVNGTNIIVRWEPLPPYQRGGVLTYYKITYKTYQKDE---------------NYKTVSPDKSSIELSGLSAYKGYEIKVQALTENHQGKITAVTHKTLEAAPSVPNEITIKMNRQISNNEKGHVAIHTALVSWKEPTDLNGVITAYQIRWWKDAYCVGDDNPCNFTQTDKKRRRRSTLNFRYILVNLTVSNKPKDRERRVTIDGLLAYTKYGFNVQEKTKAGWG 841
            C A  +P   + W+         +D L +   T   + K   +  L+IE+ +  ++G+Y+C A+N+ G    +   LY  V      F   P ++ V+P G+V  +     G P P   W +                E L+ ++       ++  +    + N + V    +G I  ++ +TV    L     DL     T       +D  ++ P     +  Y I+         +  G   P   +D + A T+Y++ G      +A  V+ +               T E  PS+P   +   + S S  +V W+ P+ PNG +  Y V Y  +             ++ ++  V +L P   Y ++V A T VG GP S  + V+T    P +  + +           +++LS   +     +  ++ +L    +  E +   +T +  +S     L +L P T Y+  +  + + G   V T T    T QS PSAP   +   S+ +    ++W  P     NG+I QY + Y   DG +     V     +     L GL  + +Y V +RA T D GP   S    V T E  P G P KV VE +N T + V W+   P ++ G +  Y++TY   +  E                ++    +     +SGL+    Y + V A T    G  +    K +    +VP   T+ ++           A++TAL+ W  P +L G +  Y+++     YC  D+             R +T++F             KD ++  T+ GL   T Y F +  K +AG G
Sbjct:  156 CAAGGNPDPEISWF---------KDFLPVDPATSNGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSSQEVMPGGSV-NLTCVAVGAPMPYVKWMMG--------------AEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSLGMIEATAQVTVK--ALPKPPIDLVVTETTATSVTLTWDSGNSEP-----VTYYGIQY--------RAAGTEGPFQEVDGV-ATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPPNAWHKHNTDAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEV----ESDTRIQLS---WLLPPQERIIMYELVYWAAEDEDQQHKVTFDPTSS---YTLEDLKPDTLYRFQLAARSDMGV-GVFTPTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHT-DVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPRGLPIIQDVMLAEAQWRPEESEDYETTISGLTPETTYSVTVAAYTTKGDGARSK--PKIVTTTGAVPGRPTMMIST---------TAMNTALLQWHPPKELPGELLGYRLQ-----YCRADEA------------RPNTIDFG------------KD-DQHFTVTGLHKGTTYIFRLAAKNRAGLG 901          
The following BLAST results are available for this feature:
BLAST of TCONS_00015985-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTPRF2.561e-16949.21Receptor-type tyrosine-protein phosphatase F OS=Ho... [more]
back to top