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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00015985-protein ID=TCONS_00015985-protein|Name=TCONS_00015985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1602bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00015985-protein vs. Swiss-Prot (Human)
Match: PTPRF (Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens GN=PTPRF PE=1 SV=2) HSP 1 Score: 559.681 bits (1441), Expect = 2.561e-169 Identity = 281/571 (49.21%), Postives = 364/571 (63.75%), Query Frame = 0
Query: 1028 ANSDHGIQTEYESVRIPVHSFTWENSQMSGNLSKNRYGNIVAYDHSRVMLNQIDNDPYSTYINANFINGYQQQKKFIAAQGPLPETVLDFWRMVWEQNTATIVMLTRLVEDNKVKCEQYWPEGKALQYGSIVVTVNSVSEMTDYTVRVFTLHKVNSPEMGKREVRQYHYMSWPDHGVPGHPTSMLSFVRHVMGDMKNRRQEGPVVVHCSAGVGRTGTFIAIETGLRQIEHDQTVDIYGTVCRMRMQRNFMVQIEGQYKFIYVSLLDSVICGNTEIEPSELVGKIRYLNLVDPKTGKTNFHEEFKRLETGMTSTDYTHSDAGHTENKQKNRYLNILPYDHNRVKLMPIAGSRSSDYINASMIDGFQQKNAFIATQAPLENTVIDFWRMIQEKNVHTIVMLTKLVERDQDKCYLYWPQAGTVSYGATHVEME---NIRQEDENIIVHDLRISNRETGKSWQIKHFMYTGWPDSGSPTTGTEFINLIGSIQRTQLSVQSGGPTLVHCSGGVGRTGVFITVYNTIDKLRSNNVIDIFHTIRQLRLQRVAMCQTLDQYIFCHNALKDYLDSFDLYA 1595
AN EYES+ P FTWENS + N KNRY N++AYDHSRV+L ID P S YINAN+I+GY++Q +IA QGPLPET+ DFWRMVWEQ TAT+VM+TRL E ++VKC+QYWP G I VT+ E+ YTVR F LHK S E KRE+RQ+ +M+WPDHGVP +PT +L+F+R V N GP+VVHCSAGVGRTG FI I+ L +++H++TVDIYG V MR QRN+MVQ E QY FI+ +LL++ CG+TE+ L I+ L V P T EFK L + T S A NK KNR +NI+PY+ RV L PI G SDYINAS +DG++Q+ A+IATQ PL + DFWRM+ E N IVMLTKL E ++KC+ YWP + Y V+ N+ Q I+ + ++++ G+S I+ F +T WP+ G P TG FI+ IG + +T+ GP VHCS GVGRTGVFIT+ ++++R V+D+F T++ LR QR AM QT DQY C+ A +YL SFD YA
Sbjct: 1346 ANDGLKFSQEYESID-PGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVELATYTVRTFALHKSGSSE--KRELRQFQFMAWPDHGVPEYPTPILAFLRRVKA--CNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFIS-ANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQ----YILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYA 1906 HSP 2 Score: 137.887 bits (346), Expect = 2.433e-32 Identity = 191/839 (22.77%), Postives = 328/839 (39.09%), Query Frame = 0
Query: 51 CVAESSPTATLKWYLKDKIIDSQQDGLTITSNTIEEQDKNKTTSTLKIETLDLDNRGEYKCEASNADG----SVERLY-DVAIFELSFVTKPDNEYVIPAGNVLRIDSTVRGHPKPIASWKLNNVHVRALNNTRIYHIERLSPDNYTLNSALIINNATARDTGNVSVVFHYMMGSISTSSFLTVLDFKLALEASDLSKNSATININNHKFDEKSTHPGYSIELILYSIKSGQTTEIKRQNLGDNPPSWALDSLEAGTQYNVSGQEKVGTFAGDVIGIT------------FTTEEDTPSAPENVIVTEVQSTS-FVVAWDTPKMPNGNITNYEVVYKNNGSSTSETSTVSGENSQIM--VPNLAPDTVYFIKVQASTLVGSGPYSEQLTVRT----PIEMGNLKISTFKTGNDSAQLRLSDHQFAKQSPDYFVVLKLYSIISNVESEVRNLTLNEIASDSLVNLTNLMPYTTYK--VTGQENSGEHKVITATTTFTTTQSAPSAPVN-IQAKSISANYFIITWEKPLKP--NGIIRQYEIRYSFYDGANTVEETVSISDTDTLEKKLDGLYSFVKYTVEIRAQTVDFGPYNSSE---VTTLESQP-GAPSKVTVEDVNGTNIIVRWEPLPPYQRGGVLTYYKITYKTYQKDE---------------NYKTVSPDKSSIELSGLSAYKGYEIKVQALTENHQGKITAVTHKTLEAAPSVPNEITIKMNRQISNNEKGHVAIHTALVSWKEPTDLNGVITAYQIRWWKDAYCVGDDNPCNFTQTDKKRRRRSTLNFRYILVNLTVSNKPKDRERRVTIDGLLAYTKYGFNVQEKTKAGWG 841
C A +P + W+ +D L + T + K + L+IE+ + ++G+Y+C A+N+ G + LY V F P ++ V+P G+V + G P P W + E L+ ++ ++ + + N + V +G I ++ +TV L DL T +D ++ P + Y I+ + G P +D + A T+Y++ G +A V+ + T E PS+P + + S S +V W+ P+ PNG + Y V Y + ++ ++ V +L P Y ++V A T VG GP S + V+T P + + + +++LS + + ++ +L + E + +T + +S L +L P T Y+ + + + G V T T T QS PSAP + S+ + ++W P NG+I QY + Y DG + V + L GL + +Y V +RA T D GP S V T E P G P KV VE +N T + V W+ P ++ G + Y++TY + E ++ + +SGL+ Y + V A T G + K + +VP T+ ++ A++TAL+ W P +L G + Y+++ YC D+ R +T++F KD ++ T+ GL T Y F + K +AG G
Sbjct: 156 CAAGGNPDPEISWF---------KDFLPVDPATSNGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSSQEVMPGGSV-NLTCVAVGAPMPYVKWMMG--------------AEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSLGMIEATAQVTVK--ALPKPPIDLVVTETTATSVTLTWDSGNSEP-----VTYYGIQY--------RAAGTEGPFQEVDGV-ATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPPNAWHKHNTDAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEV----ESDTRIQLS---WLLPPQERIIMYELVYWAAEDEDQQHKVTFDPTSS---YTLEDLKPDTLYRFQLAARSDMGV-GVFTPTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHT-DVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPRGLPIIQDVMLAEAQWRPEESEDYETTISGLTPETTYSVTVAAYTTKGDGARSK--PKIVTTTGAVPGRPTMMIST---------TAMNTALLQWHPPKELPGELLGYRLQ-----YCRADEA------------RPNTIDFG------------KD-DQHFTVTGLHKGTTYIFRLAAKNRAGLG 901 The following BLAST results are available for this feature:
BLAST of TCONS_00015985-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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