TCONS_00015973-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015973-protein
Unique NameTCONS_00015973-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length337

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015973-protein ID=TCONS_00015973-protein|Name=TCONS_00015973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
FNTLIYVGSDEFNDFSICGISRCGKIYNPTRRIIGGVDASDGEIPWQVSF
QRNGEHFCGGTLISKRWIITAAHCQIWRTDEAVLDAFDLANKHDGTKFSI
KTVINNQNYGQPLPLSYDIALVELYRDVTFSTNVRPACLVGRHEYPHVGE
KVIISGWGLRRPKPFPPYYRKRVPDVLRVTEVFVDSDSVCRAAHSSWFPI
IYQHYTQWNYNERIHDESMLCASGTFNHIDPDYGPQNKDSCHGDSGGPLM
YNLHSNQQYYLAGIVSWGTSGCMDPKQEPTIYTDVAALRGWIDRTLAGYG
VYPAFSTASTRRTTARNNCERPSIWRPATTRQPVTQP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008925XLOC_008925Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015973TCONS_00015973Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 238..250
score: 67.93
coord: 59..74
score: 57.42
coord: 114..128
score: 33.41
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 32..292
e-value: 3.3E-65
score: 232.6
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 33..292
e-value: 2.9E-49
score: 167.8
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 33..297
score: 29.913
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 33..295
e-value: 7.35747E-70
score: 219.07
NoneNo IPR availableGENE3D2.40.10.10coord: 63..136
e-value: 4.3E-23
score: 81.0
NoneNo IPR availableGENE3D2.40.10.10coord: 137..298
e-value: 3.0E-32
score: 111.2
NoneNo IPR availableGENE3D2.40.10.10coord: 32..43
e-value: 3.8E-5
score: 22.8
NoneNo IPR availableGENE3D2.40.10.10coord: 44..62
e-value: 9.6E-20
score: 70.0
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 69..74
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 239..250
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 20..297

Blast
[Close]
BLAST of TCONS_00015973-protein vs. Swiss-Prot (Human)
Match: PRS27 (Serine protease 27 OS=Homo sapiens GN=PRSS27 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.030e-36
Identity = 95/302 (31.46%), Postives = 138/302 (45.70%), Query Frame = 0 
Query:    8 GSDEFNDFSICGISRCGKIYNPTRRIIGGVDASDGEIPWQVSFQRNGEHFCGGTLISKRWIITAAHCQIWRTD----EAVLDAFDLANKHDGTKFS-IKTVINNQNYGQPLPLSYDIALVELYRDVTFSTNVRPACLVGRHEYPHVGEKVIISGWGLRRPKPFPPYYRKRVPDVLRVTEVFVDSDSVCRAAHSSWFPIIYQHYTQWNYNERIHDESMLCASGTFNHIDPDYGPQNKDSCHGDSGGPLMYNLHSNQQYYLAGIVSWGTSGCMDPKQEPTIYTDVAALRGWIDRTLAGYGVYPA 304
            GS      + CG  R         R++GG D  +GE PWQVS QRNG HFCGG+LI+++W++TAAHC    ++    + +L A  L        ++ ++ V +N  Y Q    S D+ALVEL   V F+  + P CL         G    ++GWG    +   P      P +L+   V +     C         ++Y   T++ Y  +     MLCA          +    KD+C GDSGGPL+  +   Q +  AG++SWG  GC   +  P +Y  V A   WI R +      PA
Sbjct:   16 GSQRAKAATACGRPRM------LNRMVGGQDTQEGEWPWQVSIQRNGSHFCGGSLIAEQWVLTAAHCFRNTSETSLYQVLLGARQLVQPGPHAMYARVRQVESNPLY-QGTASSADVALVELEAPVPFTNYILPVCLPDPSVIFETGMNCWVTGWGSPSEEDLLPE-----PRILQKLAVPIIDTPKCN--------LLYSKDTEFGYQPKTIKNDMLCAG---------FEEGKKDACKGDSGGPLVCLV--GQSWLQAGVISWG-EGCAR-QNRPGVYIRVTAHHNWIHRIIPKLQFQPA 284
The following BLAST results are available for this feature:
BLAST of TCONS_00015973-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRS273.030e-3631.46Serine protease 27 OS=Homo sapiens GN=PRSS27 PE=1 ... [more]
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