TCONS_00015948-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015948-protein
Unique NameTCONS_00015948-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length602

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015948-protein ID=TCONS_00015948-protein|Name=TCONS_00015948-protein|organism=Clytia hemisphaerica|type=polypeptide|length=602bp
MSVTVVISRFESSSMEDANWSNVKSKKTKKEKSKHKKQTKDQETIQNLIQ
FYKIQLCKKPLRSHNIHTCLNAHGKEELRRYPFRQDNETLRYSKNMCVNV
KTLGDCSAGDECTDSHNEAEQHFHPAIYKTVQCNRKPCLIYFCYFAHGPS
QLRKPLEKHFEVRKERTVNLSDFIAAQTAPPVEICIAKQEPIKIIRDWTG
WQQIITTTELLPCPIDDVFSRMLFKYEELQHTVRDLCFKDGCTPYIEVGQ
RPSYSPVLLMIGGASRDVICQASMSVQKFLSTAHPKTEEKFPARFLSYLE
SDQKGIKTLKTLCLNNKGIDISVERGLNTVTVWGNHLNKRQMVILELKKI
CTGFALEDASNIADARLRSLEIELQNTQKQLQDALEENYQLRNSLKSAHL
IAEKLQDEGKQIMILQKQKELPKYWESTEDYQEFNVEKGSEEWENVLTTF
LATIRIAFRFNVVSIKRIENHELWDHFVLLQKKISNMKELWHGTSQESLA
KICEKGFDRSYAGMHAVAFGQGTYFARDSHYSVKYASRDQNENRYMILAK
VLVGRYMQGYHELKHLEEGFDTAVNRLYDPSIYVTFKDFQAYPAYVVKFR
RD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008908XLOC_008908Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015948TCONS_00015948Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012317Poly(ADP-ribose)pol_cat_dom
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0003950NAD+ ADP-ribosyltransferase activity
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 360..394
NoneNo IPR availableGENE3D4.10.1000.10coord: 23..154
e-value: 0.14
score: 11.7
NoneNo IPR availableGENE3D3.90.228.10coord: 427..602
e-value: 8.0E-44
score: 149.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..40
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 433..600
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPFAMPF00644PARPcoord: 440..558
e-value: 1.0E-24
score: 87.1
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPROSITEPS51059PARP_CATALYTICcoord: 419..602
score: 32.312
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 91..119
score: 9.883

Blast
[Close]
BLAST of TCONS_00015948-protein vs. Swiss-Prot (Human)
Match: PAR12 (Poly [ADP-ribose] polymerase 12 OS=Homo sapiens GN=PARP12 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.056e-27
Identity = 68/200 (34.00%), Postives = 111/200 (55.50%), Query Frame = 0 
Query:  419 KELPKYWESTE----DYQEFNVEKGSEEWENVLTTFLATIRIAFRFNVVSIKRIENHELWDHFVL----LQK----KISNMKELWHGTSQESLAKICEKGFDRSYAGMHAVAFGQGTYFARDSHYSVKYASRDQNENRYMILAKVLVGRYMQGYHEL--KHLEEG-----FDTAVNRLYDPSIYVTFKDFQAYPAYVVKF 599
            K +P YW+S+      +Q+  +   SEE++ V   F  T+   F   V  I+R++N  LW+ +      +QK    K  + ++L+HGTS   +  IC++ FD    G+H  ++G+G+YFARD+ YS  Y+  D  +   M LA+VLVG +++G         +EG     +D+ VN + DPSI+V F+  Q YP YV+++
Sbjct:  482 KSIPDYWDSSALPDPGFQKITLSSSSEEYQKVWNLFNRTLPFYF---VQKIERVQNLALWEVYQWQKGQMQKQNGGKAVDERQLFHGTSAIFVDAICQQNFDWRVCGVHGTSYGKGSYFARDAAYSHHYSKSD-TQTHTMFLARVLVGEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSIFVIFEKHQVYPEYVIQY 677
The following BLAST results are available for this feature:
BLAST of TCONS_00015948-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PAR124.056e-2734.00Poly [ADP-ribose] polymerase 12 OS=Homo sapiens GN... [more]
back to top