TCONS_00015937-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015937-protein
Unique Name	TCONS_00015937-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	717

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015937-protein ID=TCONS_00015937-protein|Name=TCONS_00015937-protein|organism=Clytia hemisphaerica|type=polypeptide|length=717bp
MGEEKLLNGGGVQRVDKTRMGVGSWRPDWLQKFNSMKWFLLALSLASFVQ
AITVGGITAVNLQTLETEFGLTSKSTGLIMTGNDISGLLLVTVVSFFGTK
ASKPKWMGIGSVITGLGIALFALPKLMIGKYEGASNQEGFDPTCQASAGP
QGDLQCNENGGGTIGHMAVFMISQLLMGIGTTPLYTLGPTYLDENVSPRA
APVYLGIWFCCTMLGPPIGMIIGGMFLRIHTDMEAPEGVAIGDPRWVGAW
WLGYVAFFGIFIIAGFFLFLFPKRLNSKQAKKREKSIKMGQLPGEEQMKF
TFKGYLKSMFSLCKNRVFMLIVFGTTVRMLYTIGMFTFLIKILILKFGVA
PSKAGQSLGFIMMPSLIVGVMLGAVILRRAKIEIAAQTAAKICVIVSVIT
IGSSFAFLIPGCRNTNIAGIMEPYHNHTEVTGSIASQCNSDCHCKKSLYL
PICGSDGRTYHSPCHAGCTKTIVQMDKDGKIALVFGNCGCFPGNHTKSLN
IPGVMQPPPGGRPGGLPSSNSTTVANQQGFDMSKLKSMSREQKMALFKQM
GIMRKAFFNEATVGKCDRDCKNFILFIICTLFFVMIAFVASTPNKIMVLR
SVPDNQRSFALGTQFVIMRGLSFLPGPIIVGGIVDSNCISWGYDKCGKKT
NCLDYDIDAMSWTLVWLGFITSAVGTVLYFLAWWWYPVTSEKVSMNALIK
EDGGVVDEEEADENENV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008900	XLOC_008900	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015937	TCONS_00015937	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002350	Kazal_dom
IPR004156	OA_transporter
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002350	Kazal domain	SMART	SM00280	kazal_3	coord: 441..488 e-value: 0.0085 score: 20.6
IPR002350	Kazal domain	PFAM	PF07648	Kazal_2	coord: 439..475 e-value: 6.3E-8 score: 32.5
IPR002350	Kazal domain	PROSITE	PS51465	KAZAL_2	coord: 432..489 score: 11.021
IPR002350	Kazal domain	SUPERFAMILY	100895	Kazal-type serine protease inhibitors	coord: 435..473
None	No IPR available	GENE3D	1.20.1250.20		coord: 28..289 e-value: 4.7E-28 score: 97.3
None	No IPR available	GENE3D	1.20.1250.20		coord: 302..692 e-value: 9.3E-18 score: 63.8
None	No IPR available	CDD	cd01330	KAZAL_SLC21	coord: 436..490 e-value: 2.94892E-18 score: 78.8853
IPR004156	Organic anion transporter polypeptide OATP	PFAM	PF03137	OATP	coord: 38..660 e-value: 3.1E-142 score: 474.5
IPR004156	Organic anion transporter polypeptide OATP	TIGRFAM	TIGR00805	TIGR00805	coord: 17..497 e-value: 2.6E-98 score: 327.6
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 40..275 e-value: 2.22059E-7 score: 51.1605
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 30..124 coord: 162..408
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 571..686

Blast

[Close]

BLAST of TCONS_00015937-protein vs. Swiss-Prot (Human)
Match: SO4C1 (Solute carrier organic anion transporter family member 4C1 OS=Homo sapiens GN=SLCO4C1 PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 2.606e-91
Identity = 217/724 (29.97%), Postives = 341/724 (47.10%), Query Frame = 0

Query:    1 MGEEKLLNGGGVQRVDKTRMGVGSWRPDWLQKFNSMKWFLLALSLASFVQAITVGGITAVNLQTLETEFGLTSKSTGLIMTGNDISGLLLVTVVSFFGTKASKPKWMGIGSVITGLGIALFALPKLMIGKYEGASNQEGFDPTCQASAGPQGDLQCNENGGGTIGHMAVFMISQLLMGIGTTPLYTLGPTYLDENVSPRAAPVYLGIWFCCTMLGPPIGMIIGGMFLRIHTDMEAPEGVAI--GDPRWVGAWWLGYVA--FFGIFIIAGFFLFLFPKRLNSKQAKKREKSIKMGQLPGEEQMKF--TFKGYLKSMFSLCKNRVFMLIVFGTTVRMLYTIGMFTFLIKILILKFGVAPSKAGQSLGFIMMPSLIVGVMLGAVILRRAKIEIAAQTAAKICVIVSVITIGSSFAFLIPGCRNTNIAGIMEPYHNHTEVTGSIASQCNSDCHCKKSLYLPICGSDGRTYHSPCHAGCTKTIVQMDKDGKIALVFGNCGCFPGNHTKSLNIPGVMQPPPGGRPGGLPSSNSTTVANQQGFDMSKLKSMSREQKMALFKQMGIMRKAFFNEATVGKCDRDCKNFILFIICTLFFVMIAFVASTPNKIMVLRSVPDNQRSFALGTQFVIMRGLSFLPGPIIVGGIVDSNCISWGYDKCGKKTNCLDYDIDAMSWTLVWLGFITSAVGTVLYFLAWWWY--PVTSEKVSMNALIKEDGGVVDEEEADENEN 716
            + EEKL     +   ++   G  ++ P  LQ+ N+   FLL   L +  Q I V G+  +++ T+E  + + S  TGLI +  DIS  LL   VSFFG +  KP+W+   + + GLG  +F+LP+   G+Y+  S    F+ TC  +           +      ++ VF++ QLL+G G TPLYTLG  +LD++V    + +Y+G  +  ++LGP IG ++GG  L I+ D+   E   +   DPRW+GAWW+G++    F   +I  F    FPK L      +  K+ +  Q      +KF  + K +  ++ +L KN VFM +V  T+   L T G  TFL K +  +FG+  S A    G +++P   +G +LG  ++  +K  +  +   K  +  S + +  SF F+   C N   AG+ E Y+   E+ G++ + CN++C+C +S Y P+CG DG  Y SPC AGC+  +           V+ NC C                            +  T+ A   GF                             EA  GKC+  C    +F+      ++  F+A TP  + +LR V   QRS ALG QF+++R L  +PGPII G  +DS CI W  + CG K  C  YD   M+  LV +      +       A + Y  P ++  VS +    ++  VV    A+++ N
Sbjct:   70 VSEEKL-RSLSLSEFEEGSYGWRNFHPQCLQRCNTPGGFLLHYCLLAVTQGIVVNGLVNISISTVEKRYEMKSSLTGLISSSYDISFCLLSLFVSFFGERGHKPRWLAFAAFMIGLGALVFSLPQFFSGEYKLGSL---FEDTCVTTRNSTSCTS---STSSLSNYLYVFILGQLLLGAGGTPLYTLGTAFLDDSVPTHKSSLYIGTGYAMSILGPAIGYVLGGQLLTIYIDVAMGESTDVTEDDPRWLGAWWIGFLLSWIFAWSLIIPF--SCFPKHLPGTAEIQAGKTSQAHQSNSNADVKFGKSIKDFPAALKNLMKNAVFMCLVLSTSSEALITTGFATFLPKFIENQFGLTSSFAATLGGAVLIPGAALGQILGGFLV--SKFRMTCKNTMKFALFTSGVALTLSFVFMYAKCENEPFAGVSESYNGTGEL-GNLIAPCNANCNCSRSYYYPVCG-DGVQYFSPCFAGCSNPVAHRKPK-----VYYNCSCIERK------------------------TEITSTAETFGF-----------------------------EAKAGKCETHCAKLPIFLCIFFIVIIFTFMAGTPITVSILRCVNHRQRSLALGIQFMVLRLLGTIPGPIIFGFTIDSTCILWDINDCGIKGACWIYDNIKMAHMLVAISVTCKVITMFFNGFAIFLYKPPPSATDVSFH----KENAVVTNVLAEQDLN 718

The following BLAST results are available for this feature:

BLAST of TCONS_00015937-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015937-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SO4C1	2.606e-91	29.97	Solute carrier organic anion transporter family me...	[more]

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TCONS_00015937-protein (polypeptide) - C. hemisphaerica