TCONS_00015909-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015909-protein
Unique NameTCONS_00015909-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length260

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015909-protein ID=TCONS_00015909-protein|Name=TCONS_00015909-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
YSFGINQGMFSSPKQALRFLDDLPALERYHLIQDVVFKGQFPFGSSKKKS
TADENSTNSSVSTMSISSSKRTLDEGSKDTNKKPVQNDEKSSSSSSSSSS
SKSSPKLKKCSETTTETSKKDGQSDVTTAQSIDNSIQNSSIDLTRRIRFT
KSEEQQLLDGVKVHGTGNWSKILEEYNFHPSRTNVSLKDKFRLLNQGKSW
ENKTRKSRVRFSKREVKNLLKGIKRYGVGKWAKIAKHYEFHDSRTNISLK
DKYRTLQKQG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008887XLOC_008887Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015909TCONS_00015909Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 207..259
e-value: 1.1E-9
score: 48.2
coord: 145..197
e-value: 5.5E-8
score: 42.5
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 148..192
e-value: 1.6E-9
score: 37.7
coord: 208..256
e-value: 5.8E-7
score: 29.5
NoneNo IPR availableGENE3D1.10.10.60coord: 136..198
e-value: 7.1E-11
score: 41.1
NoneNo IPR availableGENE3D1.10.10.60coord: 199..260
e-value: 1.3E-12
score: 46.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..131
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 209..258
e-value: 2.17698E-17
score: 72.5999
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 147..195
e-value: 1.04951E-16
score: 70.6739
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 203..260
score: 13.39
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 141..198
score: 9.283
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 205..257
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 149..197

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015909-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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