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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00015903-protein ID=TCONS_00015903-protein|Name=TCONS_00015903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=921bp
MVFQKQYYWILILALDSMLLDAQPKEDISKEGEEHRVVFQTLYPEELATG
RLLCYGECSAGQEQQKDSIKKPVYTYDPICLGRLILISCKNNPGKRIKIN
SAFVGRHTSEGNTCLESLQCSSNITGDFQKICDYKENCDYEFGKKFLNDR
CGRVKDLAFDIRYQCVNKTNPLKEAQTTPTITDMATTQSPQMTTDEPYSP
SPILILRTFETPQTRPSPTPYSKGMNDGRERREGTFFWLITVYAWMTDER
FIREHKAHMALAIILSIFVGLVVSLFFILDHSRRSKANKAKKRKSQRDKE
STKHEQEDSLGDEQDGLIPNDDNIPMVTMNNKYPNGCLKKPKMAADHADA
LSLIVDLPPKYQEEDDVIIGECQVLIENKQKRFANGDSQNIGRYLLKNEN
DKKLNSDLYDDEEDSDTENEDFFEETWNGGKNLNNGLQVGVMSDRKISHV
MDDSTLNRLPPPPRELLENNSPPPSMSPVNEFIPPPWEFQELEHSLPSLV
VTSPDTANTGSIASKTDSGFETPKKVARPCLKNPRQQNSPNLVHEKRVRY
PSKIDVINGDLQTIEKSNLKRSESTCSDRVLFSEKRVMNDDNDFIYASQQ
MDMVNHRSKSMVLPSKSSRYNKSKRNESPLFQTRATPNSADKLVMKPILN
KSVLNRNQRKGNLHVIASSKDYQHLHNGDECDDFQMRDDYISKQRFSEID
GDSITQQETEETFIESARSDDNSVLINEHSEQEQPVSIEESGYQSRESDS
FCSSNRSTDCEDCHIFKTNHGRCKNAVRLQRERSFNKREPTLSNVKVLTK
VARRMRYENTRSAQLDNELRPSESSMEDTSSRDSVNIPRSRIKTKRRDGP
VFENNMTKRLIENNRKNPAYYSDPDGPVLGNSVAKRLIENNRKNPAYYSD
PDTTKRIKMLHSKEISTQSSC Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000922 | Lectin_gal-bd_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030246 | carbohydrate binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0030246 |
carbohydrate binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PFAM | PF02140 | Gal_Lectin | coord: 88..165
e-value: 2.1E-4
score: 21.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 808..837 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 287..323 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 726..755 |
Blast
The following BLAST results are available for this feature:
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