TCONS_00015855-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015855-protein
Unique Name	TCONS_00015855-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	551

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015855-protein ID=TCONS_00015855-protein|Name=TCONS_00015855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
GKLKEKKEKMKSDYLEDLTPRAEIFRSKLIEDFQLLASFNNSSSESPKYY
SSDLCESQELMDKMLKENPHGLVKFQVYSTKGESTYEDRRLNRVKTKNAI
PFGPWAKMIVENQFFQNLMLAIILANSIVLGIQAELTQTEASSYKGLKLV
LDIFDYISMLVFILEILLKWVDAFWDFWKNGWNNFDFLVTVMSLVPEMIK
LLSGEQTAQLAVVAENLRVFRILRSLKMVSRFAQLRIIVLTILKAFKSMV
FISTLLAVFMYIFAVAGTIMFSRQPGDPYPHIEGKFNTLGQSLATLFQLF
TLDHWFDVLNELTIVSNDIVSKCYIILWICFGAFVFRNIFAGIMVMNFQN
IRADFTTQCNEREMEIQEVSNERLLENELAVQYRRASSIVSGDGRRRSTV
LDSIQRTTTIYSNQHLSVIAEDAQSKEEEEVEDNGDNKENDYLPNNENMR
TEEEDATKPAWPLHRHSYNKGSEFPESTSWNNAVRLNLKNLSSMNKETLW
PRDYLFKYLQLMEALQDNLVERHQLQRLAGELLQEGRKQKRCKMKKILYQ
T

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008857	XLOC_008857	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015855	TCONS_00015855	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005821	Ion_trans_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005216	ion channel activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006811	ion transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005216	ion channel activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.70		coord: 111..353 e-value: 7.0E-36 score: 123.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..458
None	No IPR available	SUPERFAMILY	81324	Voltage-gated potassium channels	coord: 113..350
IPR005821	Ion transport domain	PFAM	PF00520	Ion_trans	coord: 112..353 e-value: 1.4E-33 score: 116.1

Blast

[Close]

BLAST of TCONS_00015855-protein vs. Swiss-Prot (Human)
Match: CTSR2 (Cation channel sperm-associated protein 2 OS=Homo sapiens GN=CATSPER2 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 3.287e-70
Identity = 178/533 (33.40%), Postives = 284/533 (53.28%), Query Frame = 0

Query:   20 PRAEIFRSKLIEDFQLLASFNNSSSESPKYYSSDLCESQELMDKMLKENPHGLVKFQVYSTKGES-TYEDRRLNR--VKTKNAIPFGPWAKMIVENQFFQNLMLAIILANSIVLGIQAELTQTEASSYKGLKLVLDIFDYISMLVFILEILLKWVDAFWDFWKNGWNNFDFLVTVMSLVPEMIKLLSGEQTAQLAVVAENLRVFRILRSLKMVSRFAQLRIIVLTILKAFKSMVFISTLLAVFMYIFAVAGTIMFSRQPGDPYPHIEGK--FNTLGQSLATLFQLFTLDHWFDVLNELTIVS--NDIVSKCYIILWICFGAFVFRNIFAGIMVMNFQNIRADFTTQCNEREMEIQEVSNERLLENELAVQYRRASSIVSGDGRRRSTVLDSIQRTTTIYSNQHLSVIAEDAQSKEEEEVEDNGDNKENDYLPNNENMRTEEEDATKPAWPLHRHSYNKGSEFPEST-----------SWNNAVRLNLKNLSSMNK-ETLWPRDYLFKYLQLMEALQDNLVERHQLQRLAGELL 533
            PRA+  RS+LI+ F L+      S   P++   +L +      K++  + H LV+F +   + E  ++  R L+R  V+     P   WA  ++E   F+N ++ ++  N+I+L ++ EL ++  +    LKL L++  +  +L+FILEILLKW+  F  FWK+ WN FDF+VT++SL+PE++ L+    T Q +V  + LR+ R+LRSLK++++F Q++II+L +++A KSM F+  LL +F YIFAV G  +FS     P   +E    F+ L  SL T+F LFTLDHW+ +L ++  V   + I S  Y ILW+  G+ +FR+I   +MV NFQNIR +   +   RE++++    +R       +  RR +          S + DS +  +    +  LS         E  EVE N    E D + +    +TEE  + K  +       +  S +  S+            W   V  NL  L  M++ + +WPRD LF+Y +L+E LQ NL ER +LQ  A + L
Sbjct:   13 PRADAIRSRLIDTFSLIEHLQGLSQAVPRHTIRELLDPSR-QKKLVLGDQHQLVRFSIKPQRIEQISHAQRLLSRLHVRCSQRPPLSLWAGWVLECPLFKNFIIFLVFLNTIILMVEIELLESTNTKLWPLKLTLEVAAWFILLIFILEILLKWLSNFSVFWKSAWNVFDFVVTMLSLLPEVVVLVGV--TGQ-SVWLQLLRICRVLRSLKLLAQFRQIQIIILVLVRALKSMTFLLMLLLIFFYIFAVTGVYVFSEYTRSPRQDLEYHVFFSDLPNSLVTVFILFTLDHWYALLQDVWKVPEVSRIFSSIYFILWLLLGSIIFRSIIVAMMVTNFQNIRKELNEEMARREVQLKADMFKR------QIIQRRKNMSHEALTSSHSKIEDSSRGASQQRESLDLS---------EVSEVESNYGATEEDLITSAS--KTEETLSKKREYQSSSCVSSTSSSYSSSSESRFSESIGRLDWETLVHENLPGLMEMDQDDRVWPRDSLFRYFELLEKLQYNLEERKKLQEFAVQAL 524

The following BLAST results are available for this feature:

BLAST of TCONS_00015855-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015855-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CTSR2	3.287e-70	33.40	Cation channel sperm-associated protein 2 OS=Homo ...	[more]

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TCONS_00015855-protein (polypeptide) - C. hemisphaerica