TCONS_00015824-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015824-protein
Unique Name	TCONS_00015824-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1043

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015824-protein ID=TCONS_00015824-protein|Name=TCONS_00015824-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1043bp
MEVGVKTPLNYQHGAQHDEEDSSLMMADKTQAPHTEEDTHAKIRRKEEYD
TVARILRPYCRFLVRWPVLVIGPVMFVFAWSIILSVIPALGSKDFPDFSE
PTKGFEPRGTDISKRAAALSNLDKNRWGDYQLTNVPGTNYTGRLTSRKRR
STSLSLTSKLYTDFYFIYKASGNILTAQNLNNLCRLHKKYLRSYPRYDEY
FNTQSDSTHHLANYIAALNNLADCDTLQENHVDHFKNILKQCYGYYKNGT
LKTCVDSTDAFGCTNVKQLCHYNTSLHTPSSMKRLVYNSFYYLIDSASHS
DLDNVQYTASIDSLTWYLRDPDSGFFEPLYNDRLTDLESVKIGDVQVAGF
NMWNLKFYLFQTEIITQSLYIIAAIVLVILFIWFYSGSIFIGLMTLACII
IALAISYFVYGRVFDMNFFPFLNMVTLIFIVGIGADDAFVYTGIWGEARQ
IYPLNMYVYEECLIKWTIHSIRHALLAMLVTSLTTASAFYANVSSVVTSV
KCFGLFAGTSIIINYLLMITLFPAVVILHEKYLGKCMSRLCPGACKDPAV
PAEHQRVSALQRNLDDISNTLFSQYLPTAIIKFRWIWIVFLLALGIGGCV
VTFSSPGLNPPSTGEFQMFTSGSPLEQYDLNLKKLFASGSGSGGDDRHVS
FMFGIKAVDNGYHFDPDSRGTIELYDGLLDLGNVQTWLKGFCENLIRAPF
IQRSPSCANLQLLYDSLEGACPIGQTTCCNLTLPVASDVFMKCFHSNIEE
KTMGRTWFTIHDPIFDETSDLKVILISAETTYRYTDEFGYNRDASEEVDS
WFNEQYSNITSSKFPGFWYIENHFYDLQLGLFEGTKESLGIAIGVAFIVI
LLTTLNVFLSLYSILTITFIISVTVGVLVLSGWKLNILESIVFSVAAGLS
ADFTLHYSVAYQTSLHKHDRVERVKESLSHIGPAILMGACTTFIAGLVMT
PSAVLVYLQMAQFLMLVMFISWLFSTFFFLPVCAVFGPTGNMGQLTCKKV
KKVQNSIRKNNNSTTTTNGMSNQNGAYNEGSTSKVEVPMEPIA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008850	XLOC_008850	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015824	TCONS_00015824	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001036	Acrflvin-R
IPR003392	Ptc/Disp
IPR000731	SSD

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001036	Acriflavin resistance protein	PRINTS	PR00702	ACRIFLAVINRP	coord: 503..526 score: 25.42 coord: 363..386 score: 23.75 coord: 420..444 score: 29.6
IPR003392	Protein patched/dispatched	PFAM	PF02460	Patched	coord: 822..982 e-value: 6.3E-6 score: 24.5 coord: 411..536 e-value: 1.5E-7 score: 29.8
None	No IPR available	GENE3D	1.20.1640.10		coord: 779..989 e-value: 3.5E-29 score: 101.1
None	No IPR available	GENE3D	1.20.1640.10		coord: 331..533 e-value: 2.6E-18 score: 65.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1008..1043
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	SUPERFAMILY	82866	Multidrug efflux transporter AcrB transmembrane domain	coord: 335..531
None	No IPR available	SUPERFAMILY	82866	Multidrug efflux transporter AcrB transmembrane domain	coord: 812..987
IPR000731	Sterol-sensing domain	PROSITE	PS50156	SSD	coord: 805..985 score: 8.834
IPR000731	Sterol-sensing domain	PROSITE	PS50156	SSD	coord: 419..528 score: 14.564

Blast

[Close]

BLAST of TCONS_00015824-protein vs. Swiss-Prot (Human)
Match: DISP1 (Protein dispatched homolog 1 OS=Homo sapiens GN=DISP1 PE=1 SV=3)

HSP 1 Score: 513.072 bits (1320), Expect = 1.906e-160
Identity = 350/1073 (32.62%), Postives = 542/1073 (50.51%), Query Frame = 0

Query:   41 AKIRRKEEYDTVARILRPYCRFLVRWPVLVIG-PVMFVFAWSIILSVIPALGSKDFPDFSEPTKGFEPRGTDISKRAAALSNLDKN------------RWGDYQLTNVPGTNYTGRLTSRKRRSTS---------LSLTSKLYTDFYFIYKASGNILTAQNLNNLCRLHKKYLRSYPRYDEYFNTQSDSTH----HLANYIAALNNLADCDTLQENHVDHFKNILKQCYGYYKNGTL-KTCVD----STDAFGCTNVKQLC-HYNTSLHTPSSMKRLVYNSFYYLIDSASHSDLDNVQYTASIDSLTWYLRDPDSGFFEPLYNDRLTDLESVKIGD--VQVAGFNMWNLKFYLFQTEIITQSLYIIAAIVLVILFIWFYSGSIFIGLMTLACIIIALAISYFVYGRVFDMNFFPFLNMVTLIFIVGIGADDAFVYTGIWGEARQIYPLNMYVYEECLIKWTIHSIRHALLAMLVTSLTTASAFYANVSSVVTSVKCFGLFAGTSIIINYLLMITLFPAVVILHEKYLGK---CMSRLCP-------GACKDPAVPAEHQRVSALQRNLDDISNTLFSQYLPTAIIKFRWIWIVFLLALGIGGCVVTFSSPGLNPPST--GEFQMFTSGSPLEQYDLNLKKLFASGSGSGGDDRH--VSFMFGIKAVDNGYHFDPDSRGTIELYDGLLDLGN--VQTWLKGFCENLIRAPFI-----QRSPSC--ANLQLLYDSLEGACPIGQTTCCNLTLPVASDVFMKCFHSNIEEKTMGRTWF---TIHDPIFDETSDLKVILISAETTYRYTDEFGYNRDASEEVDSWFNEQYSNITSSKFPGFWYIEN-HFYDLQLGLFEGTKESLGIAIGVAFIVILLTTLNVFLSLYSILTITFIISVTVGVLVLSGWKLNILESIVFSVAAGLSADFTLHYSVAYQTSLHKHDRVERVKESLSHIGPAILMGACTTFIAGLVMTPSAVLVYLQMAQFLMLVMFISWLFSTFFFLPVCAVFGPTGNMGQLTCKKVKKVQNSIRKNNNSTTTTNGMSNQNGAYN------EGSTSKVE---VPMEPIA 1043
            A IR    +    ++ + Y   +  WPV+V+G   MF+   +++  ++P L     PDFS+P  GFEPRGT I +R    +N+ KN            ++ D Q  +     ++     R++R              + S  Y+   F       +     + ++C +    +RS+P++ +     + ++      L NYIA LNN + C  + E  V H   +L+ C  +Y+NGTL   C D      D   CTNV + C  YN            VY   +YL+D    +      Y       +      + G  E + N  L + E+    D    + G   + +K  LFQ  ++  ++Y   AIV+V+L +  Y+ S+FI LMT+  II +L +SYF+Y  VF   FFPF+N+  LI +VGIGADDAFV   +W   +   P     + E     +I +++HA L+M VTS TTA+AFYAN  S +T+++CFG++AGT+I++NY+LM+T  PAVV+LHE+YL     C  +  P        +C   A    H+ + A+     + S   F + LP  +IKFR++W+ + LAL +GG  +   +P +  PS    EFQ+F S  P E+YD   KKLF       G++ H  ++ ++G+   DNG   +P S+G + L D   ++ +   Q W+  FC+ L    F      Q   SC     +   ++ +   P     C + + P   ++F  C    I E      +        P FD    ++ +++  ++TY +T  +       +EVDSW + + S+       G W++ N  FYDLQ  L +GT  ++G+++ VAF V+LLTT N+ +SLY+I++I   I VTVG LVL GW+LN+LES+  SVA GLS DF +HY VAY+ +    DR  +V  SLS +G A+ M A TTF+AG +M PS VL Y Q+  F+ML+M ISW F+TFFF  +C   GP G  GQ+     KK+Q S   +  ST+ ++   ++    N       G  S++E     +EP+A
Sbjct:  167 ANIRPSRPF----KLPKSYAALIADWPVVVLGMCTMFIVVCALVGVLVPEL-----PDFSDPLLGFEPRGTAIGQRLVTWNNMVKNTGYKATLANYPFKYADEQAKSHRDDRWSDDHYEREKREVDWNFHKDSFFCDVPSDRYSRVVFTSSGGETLWNLPAIKSMCNVDNSRIRSHPQFGDLCQRTTAASCCPSWTLGNYIAILNNRSSCQKIVERDVSHTLKLLRTCAKHYQNGTLGPDCWDMAARRKDQLKCTNVPRKCTKYNA-----------VYQILHYLVDKDFMTP-KTADYATPALKYSMLFSPTEKG--ESMMNIYLDNFENWNSSDGVTTITGIE-FGIKHSLFQDYLLMDTVYPAIAIVIVLLVMCVYTKSMFITLMTMFAIISSLIVSYFLYRVVFHFEFFPFMNLTALIILVGIGADDAFVLCDVWNYTKFDKP-----HAETSETVSI-TLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVNYVLMVTWLPAVVVLHERYLLNIFTCFKK--PQQQIYDNKSCWTVACQKCHKVLFAI----SEASRIFFEKVLPCIVIKFRYLWLFWFLALTVGGAYIVCINPKMKLPSLELSEFQVFRSSHPFERYDAEYKKLFMFERVHHGEELHMPITVIWGVSPEDNGNPLNPKSKGKLTL-DSSFNIASPASQAWILHFCQKLRNQTFFYQTDEQDFTSCFIETFKQWMENQDCDEPALYPCCSHWSFPYKQEIFELCIKRAIMELERSTGYHLDSKTPGPRFDINDTIRAVVLEFQSTYLFTLAYEKMHQFYKEVDSWISSELSSAPEGLSNG-WFVSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLLTTWNIIISLYAIISIAGTIFVTVGSLVLLGWELNVLESVTISVAVGLSVDFAVHYGVAYRLAPDP-DREGKVIFSLSRVGSAMAMAALTTFVAGAMMMPSTVLAYTQLGTFMMLIMCISWAFATFFFQCMCRCLGPQGTCGQIPLP--KKLQCSAFSHALSTSPSDKGQSKTHTINAYHLDPRGPKSELEHEFYELEPLA 1198

The following BLAST results are available for this feature:

BLAST of TCONS_00015824-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015824-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DISP1	1.906e-160	32.62	Protein dispatched homolog 1 OS=Homo sapiens GN=DI...	[more]

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TCONS_00015824-protein (polypeptide) - C. hemisphaerica