TCONS_00015815-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015815-protein
Unique NameTCONS_00015815-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length607

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015815-protein ID=TCONS_00015815-protein|Name=TCONS_00015815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=607bp
MADEETPNLMKITVKTATKKDVVEVSEDATVKDLREAVHVKFEAPVEQLV
LIFGGRILKDPDQLKKEGIKDGLTIHLVIKSQNKAQAQAAQAARSPPPVS
SSSSTSSTSGTTSQSTPAAGGGMGSMLGNMGGLGGLGGQNMDSIRQQMMQ
NPDMLQQALDNPLVQSITSNPDLMRSVMMSHPEMQQLVERNPEISHLLNN
PDLMRQTMQMMRNPAMMQEMMRNQDRAMSNLESIPGGFNALRRLYTDVQE
PMMNAAEEQMRSQFGQNRTADSTPTPENPQRGTENLDPLPNPWGGSAART
SATTNTTPANPFSLFSSNANRSSTNTSTSNTSTTSTPGQGSGIESMFQQL
QSNPQLTSNMTQSPFFQQAMRQMMSNPQLMQSMLQNNPMYANNPQMAELM
SQQMPNLMERMQSPEYQAAMSNPNMMQAMTNPRVMEALQQIQQGYATIQR
EAPDFFTSLGAIGGAPSFPIPPSSSTTTASSTTTPSANPTESTTSPPTST
APSTGSTPAAPTGDPLNQLFGQLMTGMGQQPAAGNQQQQAQLLSQLLGGM
QGGQAGGVQPQAPEQRFQIQLEQLANMGFHDRNANIQALISTGGDVNAAI
ERLIGSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008848XLOC_008848Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015815TCONS_00015815Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR006636STI1_HS-bd
IPR015940UBA
IPR009060UBA-like
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 10..80
e-value: 5.4E-13
score: 59.2
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 12..81
e-value: 2.4E-15
score: 55.9
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 10..84
score: 16.755
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 353..400
e-value: 0.031
score: 23.4
coord: 404..438
e-value: 0.0049
score: 26.1
coord: 134..167
e-value: 90.0
score: 1.6
coord: 181..220
e-value: 2.0E-9
score: 47.3
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 567..605
e-value: 1.9E-5
score: 34.1
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 570..603
e-value: 1.3E-6
score: 28.1
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 561..606
score: 12.716
NoneNo IPR availableGENE3D1.10.8.10coord: 563..603
e-value: 3.1E-17
score: 61.7
NoneNo IPR availableGENE3D3.10.20.90coord: 1..97
e-value: 1.7E-22
score: 78.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..343
NoneNo IPR availableCDDcd14399UBA_PLICscoord: 566..605
e-value: 4.13862E-16
score: 72.1785
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 557..605
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 5..89

Blast
[Close]
BLAST of TCONS_00015815-protein vs. Swiss-Prot (Human)
Match: UBQL1 (Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1 SV=2)

HSP 1 Score: 419.083 bits (1076), Expect = 6.977e-140
Identity = 271/626 (43.29%), Postives = 375/626 (59.90%), Query Frame = 0 
Query:    9 LMKITVKTATKKDVVEVSEDATVKDLREAVHVKFEAPVEQLVLIFGGRILKDPDQLKKEGIKDGLTIHLVIKSQNKAQAQAAQAARSP--------PPVSSSSSTSSTSGTTSQSTPAAGGGMGSMLGNMGGLGGLGGQNMDSIRQQMMQNPDMLQQALDNPLVQSITSNPDLMRSVMMSHPEMQQLVERNPEISHLLNNPDLMRQTMQMMRNPAMMQEMMRNQDRAMSNLESIPGGFNALRRLYTDVQEPMMNAAEEQMRSQFGQNRTAD-----STPTPENPQRGTENLDPLPNPWGGSAARTSATTNTTPANPFSLFSSNANRSSTNTSTSNTSTTS---TPGQGS------GIESMFQQLQSNPQLTSNMTQSPFFQQAMRQMMSNPQLMQSMLQNNPMYANNPQMAELMSQQMPNLMERMQSPEYQAAMSNPNMMQAMTNPRVMEALQQIQQGYATIQREAPD----FFTSLGAIGGAPSFPIPPSSSTTTASSTTTPSANPTESTTSPPTSTAPSTGSTPAAPTGDPLNQLFGQLMTGMGQQPAAGNQQQQAQLLSQLLGGMQGGQAGGVQPQA--PEQRFQIQLEQLANMGFHDRNANIQALISTGGDVNAAIERLIGS 606
            +MK+TVKT  +K+   V E+++V+  +E +  +F++  +QLVLIF G+ILKD D L + GI DGLT+HLVIK+QN+ Q  +AQ   +          P S+S+S S+TS            G+ S+  N      L  Q    +++Q++ NP+M+ Q ++NP VQS+ SNPDLMR ++M++P+MQQL++RNPEISH+LNNPD+MRQT+++ RNPAMMQEMMRNQDRA+SNLESIPGG+NALRR+YTD+QEPM++AA+EQ    FG N  A      S+     P R TEN DPLPNPW    +++S+ ++ T +      +      ST + TS  STT+    PG G+      G++S+ QQ+  NPQL  NM  +P+ +  M+ +  NP L   M+ NNP++A NPQ+ E M QQ+P  +++MQ         NP+ + AM+NPR M+AL QIQQG  T+  EAP     F   LGA+G           ST  +S T   +A P+E+T+             P A T +P                  G+QQ   Q+L  L          GV PQ   PE RFQ QLEQL+ MGF +R AN+QALI+TGGD+NAAIERL+GS
Sbjct:   36 IMKVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQ----MQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQ----FGGNPFASLVSNTSSGEGSQPSR-TENRDPLPNPWAPQTSQSSSASSGTAS------TVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQ---------NPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALG-----------STGGSSGTNGSNATPSENTS-------------PTAGTTEP------------------GHQQFIQQMLQAL---------AGVNPQLQNPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGS 586
The following BLAST results are available for this feature:
BLAST of TCONS_00015815-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBQL16.977e-14043.29Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1 SV=2[more]
back to top