TCONS_00015809-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015809-protein
Unique Name	TCONS_00015809-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	378

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015809-protein ID=TCONS_00015809-protein|Name=TCONS_00015809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=378bp
MLDMKMKIFPKLIIGITICFLMIGFGNLNQQFCPILQSSREDINSDFSSL
GMFLNGHLKPFGSHRPPTKVEELKYMISPEDFYMNFVIKHKPVLFKGVTK
NWPAYTQWNDEYLRDHYGDNEMNMETKDDDKYNLPTSRTFKDFLKVYKDS
NIYMVDEVLPEMREDIILPHCLRCEEMDRFFFVSYYWHSNGNTMSTVHVD
TDENLLCVVTGHKKVILVSPLYSHDLYANGARRMGVLDLNASAVDLERFP
KVMNVPYYEASVEEGDCVYIPQMWWHQVYSRKERQQAVSLWWKSKPFWRK
VKDQNPSLSGPMSNDEKGFSYADALIDYENWVQNVSESIVRIRCQEQDVR
MSHYEWETDKDPNAPTTLGDGGDFEEVV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008843	XLOC_008843	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015809	TCONS_00015809	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003347	JmjC_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.650		coord: 69..295 e-value: 5.8E-40 score: 136.9
None	No IPR available	PFAM	PF13621	Cupin_8	coord: 79..295 e-value: 1.8E-37 score: 129.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..378
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 77..299
IPR003347	JmjC domain	PROSITE	PS51184	JMJC	coord: 157..309 score: 12.844

Blast

[Close]

BLAST of TCONS_00015809-protein vs. Swiss-Prot (Human)
Match: KDM8 (Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.988e-19
Identity = 59/226 (26.11%), Postives = 105/226 (46.46%), Query Frame = 0

Query:   78 SPEDFYMNFVIKHKPVLFKGVTKNWPAYTQWNDEYLRDHYGDNEMNME--TKDDDKYNLPTSRTFKDFLKVY-----KDSNIYMVDEV---LPEMREDIILPHCLRCEEMDRFFFVSYYWHSNGNTMSTVHVDTDENLLCVVTGHKKVILVSPLYSHDLYANGARRM-GVLDLNASAVDLERFPKVMNVPYYEASVEEGDCVYIPQMWWHQVYSRKERQQAVSLWW 292
            S + F   F++  +PV+ KGV  +WP   +W+ EY+++  G   + +E  ++  D+    T  T  +F+  Y     +D       ++   +PE+++DI +P      + +        W     T+S +H D  +N L  V G K + L SP  S  LY +    +     ++    DLE+FPK    P+    +  G+ ++IP  +WH V +  +   +VS WW
Sbjct:  191 SLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRAL-DLSFSVSFWW 415

The following BLAST results are available for this feature:

BLAST of TCONS_00015809-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015809-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KDM8	3.988e-19	26.11	Lysine-specific demethylase 8 OS=Homo sapiens GN=K...	[more]

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TCONS_00015809-protein (polypeptide) - C. hemisphaerica