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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00015680-protein ID=TCONS_00015680-protein|Name=Collagen protein|organism=Clytia hemisphaerica|type=polypeptide|length=3056bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of Collagen protein vs. Swiss-Prot (Human)
Match: CO4A6 (Collagen alpha-6(IV) chain OS=Homo sapiens GN=COL4A6 PE=1 SV=3) HSP 1 Score: 395.201 bits (1014), Expect = 1.714e-111 Identity = 320/811 (39.46%), Postives = 400/811 (49.32%), Query Frame = 0
Query: 2327 GDQGPVGSIGNTGRKGDQGDPG----------------FGPKGEPGEAGGEGFPGRDGEKG-------------------FRGRDGTVGP------RGPIGDKGSEGPSGPKGGMGEDGFIGFNGLEGPPGPKGQRGDAVDEGQK-------GLKGEPGEPGLKGPRGDQGSLPPGNT-LKDLRGEEGNQGPAGDEGGEGPEGGLKVAPGPLGLAGEKGEKGVAGDFGERGPLGPLGPDGFKGEEGPTGEKGDSGSPGFFGKIGEKGVTGDGGEPGVSLKGEPGVPGEPGSIGDLGPEGEVGLRGFYGMEGGKGEVGEIGPPGRQQLPEEGKDQEMKGRVGEKGFSGDFGPDGEPGEPGILL-----------------------------------ERQGEFGSKGLKGAQGPKGATGERGIGGLIGMIGKDGLKGRTGLDGDPGAAGPQG------------AEGEMGPVIGGGEKGDFGGLGDV-------GLTGRPGLKGVKGFIGDIGPKGDLGIKGGQGDSGFPG------------MIGDQGPPGGVGTPGPRGEEGPLGLEGPGGPAGPMGSAKNFGHNIVRHSQNSFVPSCPRDYMVLWEGYSLMYTVGNGYAHSQDLGDAGSCSRSFSTLPFLFCSLTGTCQYASRNDFTYWLAGDVQQPMMPVTNDAIEPFISRCVVCKAPDINMAVHSQDVVLPSCPVGYESLWSGFSFMMVAAAGNTGSGQSLGSSGSCLEEFRPKPFIECQGARGTCHFFSDKFSFWLTTIDPSRQF-EIPTPLTLIETKGDDLSSRVSRCRVCLRS 3021
G GP G G G KGD+G+PG G KG G AG GFPG G+KG +G G GP RG G KGS G +G G GE G G G G PG G G D GQ G KG+PGE G KG +G G + GN +GE+G G +GD G L APG G+AG +GE G+ G G +G +GPLG G G KG G PG G G G G G PG S+ G PG G PG P+GE G G IG PG+ L +G+ G++GF G GP G PG PGI L QG+ G G G GPKG G++GI G G+ G+ GLKG + G+PG G G +G+ GP G +GD G G G PG+ G+ G GD G +G +G++G +G G PG +GD G PG GP G EG G +GP G G G + G+ +V+HSQ+ VP CP LW GYSL++ G AH+QDLG AGSC FST+PF++C++ C YA RND +YWL+ PMMPV+ I +ISRC VC+AP +AVHSQD+ +P CP+G+ SLW G+SF+M AAG G GQSL S GSCLE+FR PFIEC GARGTCH+F++K+SFWLTT++ +QF E+P TL K L +RVSRC+VC++S
Sbjct: 930 GKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLI--GNIGFPGNKGEDGKVGVSGDVG-------LPGAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGSPGL------IGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPG------PKGEKGYPGI-----------GIGAPGKPGL---------RGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELGLKG---MRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDPGQTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPG---LQGPPGFEGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETL---KAGQLHTRVSRCQVCMKS 1690 HSP 2 Score: 182.57 bits (462), Expect = 1.321e-45 Identity = 325/995 (32.66%), Postives = 411/995 (41.31%), Query Frame = 0
Query: 737 RGRPGNYGGRGAPGPRGPLGSAGLA------GKQGPRGDPGLNGMVGERGPKGLIGLPGFPGFDGIPGVPGVEG--RQGEMGGCGLPGQPGEAGKAGLGGFTGVSGRKGPSGTKGRKGEPAPDNPDLEILPGDDGDPGEGGDGGFKGQKGEIGMLGMIGDDGVDGSEG---PKGFMGEMGDEGVVTL-----EKGPKGFTGDRGEAGSPGVAEAT------SGELLQGPEGSSGPKGEPGMKGQVGQNSDVKGIQGERGEQGFIGQTGVEGGPGPAGEKGPSGELGFQGKKGQQGEAGMDGLTGEKGQQGE--PGFEQGAPGPKGKRGNPAEPTSDASPKGAKGPLGDDGDPGPNGAIGAEGEEGPKGERGMSK-----------------------------MGNSGDDGAVGPRGPQGKNGMQGEAGMGGLRGPKGIKGDIGAKGDTGRNAKA--ISGDPGMDGPPGQKGVFGSLGNPGEVGPRGPTMQLEQNCIENVCPQNRKGDPGQQGDTGPIGPAGEKGVNGSKGYPGGPCPTCPSGDDGISGDFGEPGKVGEKGELGSAGDPGPAGVKGQRGEKGPSGFRGEGGIKGLQGDAGD--IGGKGPDALGESLAEEGDKG----PPGSDGINGTRG------ADGPKGLPGKKGE------LGEQGKRGENGLKGE------------------SGPAGNKGQPGLGGSKGEKGDQGEDSRGLTGEGGELGPEGRQGAVGEVGLKGRKGEAGEEPTEEEKEAMKNKMAGDEGVRGADGEPGEPGRNSTTPGERGPRGPKGKMGTVGPKGYGGIKGDNGFNGRSGEDGDPGPAGFPGKNGPRGQS------GEPGKAGKEGIAPKGQKGETGGQGPNGERGPDAPPPPGCFNFGDAADVGFIM---DSSKSVNEADFNRQKEFIDQILQQFNIGPKQTQAAVIKYGRTASVEINFDDFYTYPSLKNKIDNIEYDSARESRLDLALKLARDDMF 1631
RG PG+ G G PG +G GS G+ G GP G PG G G +G +GL G PG PG G G PG G E LPG PG G+ GL GF G+ G+ G G G G P +I ++G PGE G G G KG +G G+ G GV G G PKG G G G V GP G G G G+PG + +GP GS KG PG+KG G N + G++G G G G + G P GEKG G +GF G G G G GL G G G+ P G PG KG RGNP P SP+ L GD G G+ G+ G GP+G++G + MG G G G G G GM GE+G G+RG G+ G G G G N + ISG PG G PG+ G G+ G G +G N+ G PG +G+ G +G +G+ G+ G+ G+PG G+ G+ G PG G +G +G G PG G KG G G G G G KG G G G GP L E+G G PG G+ G +G GP GLPG G G+ G G GL GE G G+ G PG+ G KG KGDQG G +G GELG +G +G G +G G+ + M G G RG+ G G+PG+ T + P GP +G G G G+ GD G G G G G G PGK+GP G G+PG G +G P G +G G QGP G P P G + VG+ + S+ V + ++ L Q +A G S F T P + I+ + + + R + A M
Sbjct: 630 RGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPE-----LPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPG-NPGLVGLKGSPGSPGVAGLPALSG---PKGEKGSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPG-PVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLIG--------------NI------GFPGNKGEDGKVGVSGDVGLPGAPGFPG---------VAGMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQGIP--GFSGLPGELGLKGMRGEPGFMGTPGK--------VGPPGDPGFPGMKGKAGPRGSSGLQGDPGQTPTAEAVQVPPGP---LGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQG--PPGFEGAPGQQGPFGM--PGMP--------GQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLLFVE---GQEKAHNQDLGFAGSC---LPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMM 1554 HSP 3 Score: 169.859 bits (429), Expect = 9.775e-42 Identity = 299/812 (36.82%), Postives = 356/812 (43.84%), Query Frame = 0
Query: 770 PGLNGMVGERGPKGLIGLPGFPGFDGIPGVPGVEGRQGEMGGCGLPGQPGEAGKAGLGGFTGVSGRKGPSGTKGRKGEPAPDNPDLEILPGDDGDPGEGGD--------GGFKGQKGEIGMLGMIGDDGVDGSEGPKGFMGEMGDEGVVTLEKGPKGFTGDRGEAGSPGVAEATSGELLQGPEGSSGPKGEPGMKGQVGQNSDVKGIQGERGEQGFIGQTGVEGGPGPAGEKGPSGELGFQGKKGQQGEAGMDGLTGEKGQQGEP-GFEQGAPGPKGKRGNPAEPTSDASPKGAKGPLGDDGDPGPNGAIGAEGEEGPKGERGMS----KMGNSGDDGAVGPRGPQGKNGMQGEAGMGGLRGPKGIKGDIGAKGDTGRNAKAISGDPGMDGPPGQKGVFGSLGNPGEVGPRGPTMQLEQNCIENVCPQNRKGDPGQQGDTGPIGPAGEKGVNGSKGYPGGP-CPTCP-----SGDDGISGDFGEPGKVGEKGELGSAGDPGPAGVKGQR---------GEKGPSGFRGEGGIKGLQGDAGDIGGKGPDALGESLAE-------EGDKGPPGSDGINGT---RGADGPKGLPGKKGELGEQGKRGENGLKGESGPAGNKGQPG----LGGSKGEKGDQGEDSRGLTGEGGELGPEGRQGAVGEVGLKGRKGEAGEEPTEEEKEAMKNKMAGDEGVRGADGEPGEPGRNSTTPGERGPRGPKGKMGTVGPKGYGGIKGDNGFNGRSGEDGD-----------PGPAGFPGKNGPRGQSG----EPGKAGKEGIAPKGQKGETGGQGPNGERGPD 1524
PGL G G+RG G G G PG G G G +G++GE + G PG+ G +G GF GV G G G G G P + PG+ G PG G+ G G G G+ GD G DG G +G G G +TL G G G G+PG GP+GS +G PG GQ G + G +GE G G + + G PGP GEKG G G GK G G G GL G KG G+ G E GAPG +G +G G KG LGD G PG G G G GPKGERG ++G G G+ GP G +GK+G+ G G G+ G G KG G KG G K G PG+ G PG G+ G G+PG PG G GP GEKG G G+PG P P P G G +G G G+ G GE G G+PGP G+ R G+KG G G G G +GD G+ G GP L + G GPPG GI G +G+ G G PG GE G QG RG GL G SG G KG G + GS G KG GE G G +GR G +G +G G KGE G+ + G GV G GEPG PG + G +G GP G G +GPKG+ G G +G NG G G PGPAG PG G +G G PGK G G KG +G G QGP G G
Sbjct: 509 PGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKG----ITLPCIIPGSYGPSGFPGTPG---------FPGPKGS---RGLPGTPGQPGSS----GSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGL----------TGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVK--KGLPGLKGLPGNPGLVGLKGSPG--------------------------SPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPGES--------GFKGTKGRDGLIGNIGFPGNKGEDGK--VGVSGDVGLPGAPGFPGVAGMRGEPGLPGSS----GHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQ--KGDRGFPGLQGPAGLPGAP 1246 HSP 4 Score: 150.984 bits (380), Expect = 4.992e-36 Identity = 265/767 (34.55%), Postives = 329/767 (42.89%), Query Frame = 0
Query: 730 LKGPKGSRGRPGNYGGRGAPGPRGPLGSAGLAGKQGPRGD--------PGLNGMVGERGPKGLIGLPGFPGFDGIPGVPGVEGRQGEMGGCGLPGQPGEAGKAGLGGFTGVSGRKG------------------------PSGTKGRKGEPA----PDNPDLEILPGDDGDPGEGGD---GGFKGQKGEIGMLGMIGDDGVDGSEGPKGFMGEMGDEGVV--TLEKGPKGFTGDRGEAGSPGVAEA---TSGELLQG---PEGSSGPKGEPGMKGQVGQNSDVKGIQGERGEQGFIGQTGVEGGPGPAGEKGPSGELGFQGKKGQQGEAGMDGLTGEKGQQGEPGF--EQGAPGPKGKRGNPAEPTSDASPKGAKGPLGDDGDPGPNGAIGAEGEEGPKGERGMSKMGNSGDDGAVGPRGPQGKNGMQGEAGMGGLRGPKGIKGDIGAKGDTG-RNAKAISGDPGMDGPPGQKGVFGSLGNPGEVGPRGPTMQLEQNCIENVCPQNRKGDPGQQGDTGPIGPAGEKGVNGSKGYPGGPCPTCPSGDDGISGDFGEPGKVGE---------------------KGELGSAGDPGPAGVKGQRGEKGPSGFRGEGGIKGLQGDAGDIGGKG---PDALGESLAEEGDKGPPGSDGINGTRG----------ADGPKGLPGKKGELGEQGKRGENGLKGESGPAGNKGQPGLGGSKGEKGDQGED----------SRGLTGEGGELGPEGRQGAVGEVGLKGRKGEAGEE 1402
GP+G +G PG G G G G +GS GL G +G GD PG G+ G G KG +G G PG G+ G PG+ G +GE G G PGQ G+ G G G G+ G+ G P G+ +KG P P NP L L G G PG G G KG+KG +G +G G G+ G G +G G G G + + G G GDRG G G+ S L+G +GS+G G PG +G G+ GV G PGP G G G G +G G G GM G +G +G +G PG G PG KG G E + PKG G G G G +G IG G G KGE G K+G SGD G G G G GM+GE G+ G G +G G +G+ G G + G G++G PG KG G+ G P G GP L E P G PG+ G G G G G+ G G PG P + PS G GD G PG GE G+ G G PGP G KG +G G SG GE G+KG++G+ G +G G P +G GP GS G+ G G GP GLPG +G+ G +G G +G GL GSKG G G+D + G G G GP G +GA G+ G G G G+
Sbjct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core: 132.494 bits (332), Expect = 2.244e-30 Identity = 320/966 (33.13%), Postives = 402/966 (41.61%), Query Frame = 0
Query: 734 KGSRGRPGNYGGRGAPGPRGPLGSAGLAGKQGPRGDPGLNGMVGERGPKGLIGLPGFPGFD---------GIPGVPGVEGRQGEMGGCGLPGQPGEAGKAGLGGFTGVSGRKG-----PSGTKGRKGEPAPDNPDLEILPGDDGDPGEGGDG--------------------------GFKGQKGEIGMLGMIGDDGVDGSEGPKGFMGEMGDEGVVTLEKGPKGFTGDRGEAGSPGVAEATSGELL-----------QGPEGSSGPKGEPGMKGQVGQ-----NSDVKGIQGERGEQGFIGQ-----------TGVEGGPGPAGEKGPSGELGFQGKKGQQGEAGMDGLTGEKGQQGEPGFEQGAPGPKGKRGNPAEPTSDASPKGAKGPLGDDGDPGP---------------NGAIGAEGEEGPKGERGMSKM-GNSG---DDGAV------------------------GPRGPQGKNGMQGEAGMGGLRGPKG---------------IKGDIGAKGDTGRNA-KAISGDPGMD-----------------GPPGQKGVFGSLGNPGEVGPRGPTMQLEQNCIENVCPQNRKGDPGQQGDTGPIGPAGEKGVN---------GSKGYPGGPCPTCPSGDDGISGDFGEPGKVGEKGELGSAG---DPGPAGVKGQRGEKGPSGF---RGEGGIKGLQGDAGDIGGKGPDALGESL-AEEGDKGPPGSDGINGTRGADGPKGLPGKKGELGEQGKRGENGLKGESGPAGNKGQPGLGGSKGEKGDQGEDSRGLTGEGGELGPEGRQGAVGEVGLKGRKGEAGEEPTEEEKEAMKNK-------MAGDEGVRGADGEPGEPGRNSTTPGERGPRGPKGKMGTV---GPKGYGGIKGDNGFNGRSGEDGDPGPAGFPGKNGPRGQSGEPGKAG-------KEGIAPKGQKGETGGQGPNGERGP 1523
KG+RGRPG G +G GP+G GS GL+G +G RG PGL G G +G KG +G+PGF G + G G PG++G G G G PG G G G G G G KG P KG KG+P P L+ + G G PG G GF+G+KG G +G+ G G S G FMG + E GPKGF G G G PG+ +GP GS G +G PG +G+ G + +GI+G++G+ G G +G G PG G G G+ G QG +G G G+ L+G G G QG PG KG +GNP T A+ + L P +G G GE+GPKG G+ + G+SG DG V G RG +G G QG AG GL GP G I+G G +GD+G + + G+PG D G PG+KG+ G PGE G GP P+ GD G+ G G G G KG+ G G+PG P P G G+ G G+PG G KGE GS G P G G RGEKG GF G+ G+ G+ G G G KG A G+ AE G G G G+ G +G G GLPG KG G+ G G G +G G G GQPG GS G G +G+ G GA G G+ G G+ G + ++ K + G+ G+ G G PG PG + P GP+G KG +G V G G GI G G G G G GP+G G G +G G PG G + KG KG G G NG GP
Sbjct: 46 KGARGRPGPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKGMKGDPG--LPGLDGITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALG----PQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGL---PGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSPGLPGSKG--ATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKS--------------GLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGV-AGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGP 985 HSP 6 Score: 117.472 bits (293), Expect = 7.941e-26 Identity = 179/504 (35.52%), Postives = 218/504 (43.25%), Query Frame = 0
Query: 2312 GPRGPSGRPGGDG------PPGDQGPVGSIGNTGRKGDQGDPGF-------------GPKGEPGEAGGEGFPGRDGEKGFRGRDGTVGPRGPIGDKGSEGPSGPKGGMGEDGFIGFNGLEGPPGPKGQRGDAVDEGQKGLKGEPGEPGLKGPRGDQGSL---PPGNTLKD--LRGEEGNQGPAGDEGGEGPEG------------------------GLKVAPGPLGLAGEKGEKGVAGDFGERGPLGPLGPDGFKGEEGPTGEKGDSGSPGFFGKIGEKGVTGDGGEPGVSLKGEPGVPGEPGSIGDLGPEGEVGLRGFYGMEGGKGEVGEIGPPGRQQLPEEGKDQEMKGRVGEKGFSGDFGPDGEPGEPGILLERQGEFGSKGLKGAQGPKGATGERGIGGLIGMIGKDGLKGRTGLDGDPGAAGPQGAEGEMGPVIGGGEKGDFGGLGDVGLTGRPGLKGVKGFIG-DIGPKGDLGIKGGQGDSGFPGMIGDQGPPGGVG 2766
GP+G G PG G PG GP G G +G G G PG GP G + G G G G G G G+ G G G GP G KG +G GF G GL G PG +G +G G+ G G G PG KG RG+ G + P + + L+G++G+QG AG G GP G G+ PGP G G +G G+ G G GF G G +G +G GSPG G G G+ GD G+ V + G P GP+G+ G GF G +G G +G IG PG KG G+ G SGD G G PG PG+ R G GL G+ G +GA G G GLIG G G G GL+G PG +G G GP I G G G PG KG KG+ G IG G G++G +GD GFPG+ G G PG G
Sbjct: 795 GPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGI---------TGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQ-TVEISGSP------------GPKGQPGESGFKGTKGRDGLIGNIGFPGN------------KGEDGKVGVSGDVGLPGAPGFPGVAGMR----GEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGT---KGTHGTPGPSI----------TGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPG 1247 HSP 7 Score: 97.4413 bits (241), Expect = 1.096e-19 Identity = 200/576 (34.72%), Postives = 237/576 (41.15%), Query Frame = 0
Query: 2310 EGGPRGPSGRPGGDGPPGDQGPVGSIGNT---------GRKGDQGDPGF-GPKGEPGE--------------------AGGEGFPGRDGEK-----------------------GFRGRDGTVGPRGPIGDKGSEGPSGPKGGMGEDGFIGFNGLEGPPGPKGQRGDAVDEGQKGLKGEPGEPGL---------KGPRGDQGSLP--PGNTLKD-LRGEEGNQGPAGDEGGEGPEGGLKV-APGPLGLAGEKGEKGVAGDFGERGPLGPLGPDGFKGEEGPTGEKGDSGSPGFFGKIGEKGVTGDGGEPGVSLK-GEPGVPGEPGSIGD---------LGPEGEVGLRGFYGMEGGKGEVGEIGPPGRQQLPEEGKDQEMKGRVGEKGFSGDFGPDGEPGEPGILLERQGEFGSKGLKGAQGPKGATGERGIGGLIGMIGKDGLKGRTGLDGDPGAAGPQGAEGEMGPVIGGGEKGDFGGLGDVGLTGRPGLKG----------------------VKGFIGDIGPKGDLGI------KGGQGDSGFPGMIGDQGPPGGVGTPGPRGEEGPLGLEG 2781
GG +GP+G PG GP G GP G G G +GD G GF G GEPG+ G +G PG GEK G +G+DG G +G G KG P G G GF G G GP G +G G G G KGEPG PGL GPRG++G LP PG KD L G G+ G G +G G G + APG GL G G KG GD G G G G+ G G KG+ GSPG G++G+ G G G G+ K G PG PG PG G GP G + +G G++G G G +G G P + G GEKG G G G PG PGI G++GLK GI G G +G G G G GD G GP G P+ KGD G G G G PG +G +KG G GP G +GI KG G +GFPGM G+ G G G+PG G G GL+G
Sbjct: 520 SGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKG-LPGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLP------GLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIP-------GTRGLK------------GIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKG 1069 HSP 8 Score: 95.5153 bits (236), Expect = 4.503e-19 Identity = 172/505 (34.06%), Postives = 219/505 (43.37%), Query Frame = 0
Query: 2363 FPGRDGEKGFRGRDGTVGPRGPIGDKGSEGPSGPKGGMGEDGFIGFNGLEGPPGPKGQRGDAVDEGQKGLKGE-----------------------PGEPGLKGPRGDQGSLPPGNTL----------KDLRGEEGNQGPAGDEGGEGPEGGLKVAPGPLGLAGEKGEKGVAGDFGERGPLGPLGPDGFKGEEGPTGEKGDSGSPG---------FFGKIGEKGVTGDGGEPG----VSLKGEPGVPGEPGSIGDL--GPEGEVGLRGFYGMEGGKGEVGEIGPPGRQQLPEEGKDQEMKGRVGEKGFSGDFGPDGEPGEPGILLE--RQGEFGSKGLKGAQGPKGATGERGIGGLI------------GMIGKDGLKGRTGLDGDPGAAGPQGAEGEMG----PVIGG--GEKGDFGGLGDVGLTGRPG------LKGVKGFIGDIGPKGDLGIKGGQGDSGFPGMIG---------------DQGPPGGVGT---PGPRGEEG 2775
PG G +G RG G GP G G G GPSGPKG GE G+ G RGD+ +G +G+ GE PGE GL G G++G P + L G++G G G +G G +G + + P + G G G G G GP G G G G+ G +G KG+ GSPG F G GEKG+ G G PG + G PG+PG G+ GD+ G G +G G+ G KG +G+ G PG +KG G+ G G G G PG PG + + G G G+KG G GA G GI G G I K GL G GL G+PG G +G+ G G P + G GEKG G +G G+ G PG LKG+ G G +GP G G G +GD G PG +G D+G G G+ PGPRG++G
Sbjct: 508 LPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPG------DRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKG-ITL---PCIIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPG------------LKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKG 990 HSP 9 Score: 88.1965 bits (217), Expect = 6.386e-17 Identity = 199/565 (35.22%), Postives = 240/565 (42.48%), Query Frame = 0
Query: 2312 GPRGPSGRPGGDGPPGDQGPVGSIGNTGRKGDQGDPG-FGPKGEPGE-----------AGGEGFPGRDGEKGFRGRDGTVGPRGPIGDKGSEGPSGPKGGMGEDGFIGFNGLEGPPGPKGQRGDAVDEGQKGLKG--------------------------EPGEPGLKGPRGDQGSLPPGNTLKDLRGEEGNQGPAGDEGG-----------EGPEGGLKVAPGPLGLAGEKGE---KGVAGDFGERGPLGPLGPDGFKGE------EGPTGEKGDSGSPGFFGKIGEKGVTGDG--------------GEPGVSLKGEPGVPGEPGSI-----------------GDLGPEGEVGLRGFYGMEGGKGEV------GEIGPPGRQQLPEEGKDQEMKGRVGEKGFSGDFGPDGEPGEPGILLERQGEFGSKGLKGAQGPKGATGERGIGGLIGMIGKDGLKGRTGLDGDPGAAGPQGAEGEMGPVIGGGEKGDFGGLGDVGLTGRPGLKGVKGFIGDIGPKGDLGIKGGQGDSGFPGMIGDQGPPGGVGTPGPRGEEGPLGLEG 2781
GPRGP G G GPPG QG G++G G G QG G G G PG +G G PG G G +G +G G RGP G G SG G +G GF G G +G PG G GL G E G PGL+G +G +G+L L+G +G+ G +GG GL PG G G++G +G AG G GPLGP GP G KGE +G G++GDSGS GF G IGE G G G PG KG PG+PGE G G G +G+ GL G G+ G KG G GP G P + +G G G G G GEPG PG++ + L G GP+G E+G+ G G+ GKDGL G+ G PG G +GA G+ I G E G G G GLTG KGF+GD G G G+ G G G G G G PG VG PG G GP G++G
Sbjct: 300 GPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPG-------RTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNL-------GLKGIKGDSGFCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGE--KGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPE-------LPGFPGPRG---EKGLPGFPGLPGKDGL---PGMIGSPGLPGSKGATGD----IFGAENGAPGEQGLQGLTGH------KGFLGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKG 825 The following BLAST results are available for this feature:
BLAST of Collagen protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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