TCONS_00015502-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015502-protein
Unique NameTCONS_00015502-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015502-protein ID=TCONS_00015502-protein|Name=TCONS_00015502-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
MINNEATVEDDSYIVDDTHKVLREKERSTPKFQGNSPQLCFRRYLVDWLA
LIGEKLHLTHGMVHLGVALMDSVMDKMDFPKQNQLNLMAICCLYVATKVD
ERDDLIPRVQTLKSIFTNDFEVEDFLEMELNIMSLLEWRLLLPTPVHFIG
FYLEYSIDENDKHSGETITHPQKARMYLRKYTMYFLEVALQNHEFNHYLP
SIVTSSAIAASRLCLKITPTWCHSLEWITKYDSQQIEECVDKMIRLYQED
DDRSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008653XLOC_008653Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015502TCONS_00015502Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004367Cyclin_C-dom
IPR013763Cyclin-like
IPR006671Cyclin_N
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 143..255
e-value: 4.3E-13
score: 59.5
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 143..249
e-value: 2.1E-16
score: 59.9
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 146..245
e-value: 2.2
score: 7.2
coord: 47..134
e-value: 9.2E-11
score: 51.8
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 27..133
e-value: 4.1E-21
score: 74.5
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 134..255
e-value: 3.2E-26
score: 91.7
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 12..140
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 144..251
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 25..140
e-value: 1.5E-19
score: 70.0
NoneNo IPR availablePIRSFPIRSF001771Cyclin_A_B_D_Ecoord: 7..255
e-value: 2.4E-31
score: 107.3
NoneNo IPR availableCDDcd00043CYCLINcoord: 42..133
e-value: 1.67124E-9
score: 51.8557

Blast
[Close]
BLAST of TCONS_00015502-protein vs. Swiss-Prot (Human)
Match: CCNJ (Cyclin-J OS=Homo sapiens GN=CCNJ PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.863e-42
Identity = 85/242 (35.12%), Postives = 139/242 (57.44%), Query Frame = 0 
Query:   14 IVDDTHKVLREKERSTPKFQGNSPQLCFRRYLVDWLALIGEKLHLTHGMVHLGVALMDSVMDKMDFPKQNQLNLMAICCLYVATKVDERDDLIPRVQTLKSI--FTNDFEV---EDFLEMELNIMSLLEWRLLLPTPVHFIGFYLEYSIDENDKHSGETITHPQKARMYLRKYTMYFLEVALQNHEFNHYLPSIVTSSAIAASRLCLKITPTWCHSLEWITKYDSQQIEECVDKMIRLYQED 250
            +  D H+ LR KE   P ++G SPQL  RRY  D +A++  +  L     HL V L+D  MD+ D   Q QL+L+A+ CL +A+K +E++D +P+++ L S+   TN   V   ++ L MEL ++   +W L LPT  HFI +YL  ++ E D H G  +   +K ++Y+ KY  YFLEV+LQ           V ++ +A+SR+ L+++PTW   L  +T Y    + +C+++++  +  D
Sbjct:   12 LAADIHQALRYKELKLPSYKGQSPQLSLRRYFADLIAIVSNRFTLCPSARHLAVYLLDLFMDRYDISIQ-QLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLYMAKYADYFLEVSLQ-----------VAAACVASSRIILRLSPTWPTRLHRLTAYSWDFLVQCIERLLIAHDND 241
The following BLAST results are available for this feature:
BLAST of TCONS_00015502-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCNJ1.863e-4235.12Cyclin-J OS=Homo sapiens GN=CCNJ PE=2 SV=2[more]
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