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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00015426-protein ID=TCONS_00015426-protein|Name=TCONS_00015426-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1418bp
TRFEHQQREVLLWRARPLQKSTRPNLFAEYVLFCRHSIFCKGQNHDQSAD
QMKVKSFQFLNSKSKMAGVEKREEKLASENNSVASHNEEVQATEEGHENV
CIVPSSESNEILLYVSDGNAQGVQDLLRVALNQPSLVGTTTNLSDIKDGE
AKLVGEIQGTEGGHTIISVPVSSIASGLGPTAEGGIIQTDHSEHQVVQVQ
IQQSDPSTIDTKTQLFQLADLTHNLNADEVEQVTAQVGVVHHGVELDATE
VLKSEADALMGDFIIANVDAAENEKIPGELNIGDSFYCLEDLEESLRLYE
EKNGIKLYKRDVRSLEALLKRSLKLQKLDKINERLKYGQLLYCCVYGGKR
KAQKIACMDESGLARYTDCKMFIRFAISDDGMKLVVNGKFETHNHVEVVT
NEQEPEAQYFSNTGNASEVRLGAGFVDLEELYKAINKYETDNHVHLWRRD
GRTVEALAKRAPGTARKIMETNPGLRFAELRFCCSYGGRQSAEERKDKKN
PQNTFKQGCEMHIRFGVSEDGSQLVVKSMSEEHNHEINEETIVKEALHPD
LCVYVSKLVWQDLHISIDDVKAKLEDYVLSVMFKGQQPPPRTRRQYFPSK
KQVRYFMAKAKTSLNISPEAQQKLESLMERLKEARSDEKMVSNFHVQNVM
SGFDLNNEESMEEDAASQSLGGLNEQNAKLLFCHQTPQQQRLMRRYNTQV
IMTQISDLHSKIPFPLFCLYVQTNVDFQLVGEFICQANDHIMIEEGLQTI
KEWNPGWNPKFVVVDFEDQQITAVENAFQGAFALVSDASREKAWHEWLDM
ESNGVVEFKEDVMKYLDAIAFSYSEETLNKAARELEESDVWKMSDKMRNW
FQLNWLAQAKRWVAGYRPDDYLMAIHNDRTLSDELKMFKSIKLANKSAPL
NDLIQQLIEHIVPVSKKQYELLNKDSFRLQNELYYIYPDIPNYLSNRPGK
LTKHIYERLKIASTRNYYITEIHPGIFSVQGCEEPDDQLHTISYGDTTSY
PSCDCEDWQRFKLPCVHLAAIFNSYPDWTWDMMSVPYRTNPIFQADWSVV
SQDIRTDAPGLLIDVGTQTTGATLLPAYTPEFSLTRMNDSRRPAETPQVL
ANQCRGLLQQISKLQLAHHTRDSLYRLRSELKELVSIFSTAPKTKVVFPI
SSIPLSNKSRKQSGAQTVFEQYNVKLVTPKQVALSGKVSETTTIHTTEAV
VSSHHHQHQTQQEMESDGDEVDGMYISTVSEEQIIEDQTTETLAHIPANT
TSTTSTTTRKRVQSPSPFFKQQPSEKKTRLMTEDEILAASQSIAVKTTDP
TENVLNATEMQFPANATLSTVIDGQTINISLDQVAAAMNNAKMATNAVEE
AGDGGHSQEILTFTTNSSADISDESGAHVVENLVVAEDAGMVVAEETENE
NETISQQDQIKTDDESVK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 69..89 |
| None | No IPR available | COILS | Coil | Coil | coord: 617..637 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1396..1418 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 70..96 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1250..1278 |
| IPR004330 | FAR1 DNA binding domain | PFAM | PF03101 | FAR1 | coord: 475..538
e-value: 1.0E-6
score: 29.2 |
| IPR007527 | Zinc finger, SWIM-type | PFAM | PF04434 | SWIM | coord: 1002..1025
e-value: 2.0E-5
score: 24.1 |
| IPR007527 | Zinc finger, SWIM-type | PROSITE | PS50966 | ZF_SWIM | coord: 990..1026
score: 9.285 |
| IPR029309 | Calcium-responsive transcription factor | PFAM | PF15299 | ALS2CR8 | coord: 529..612
e-value: 5.5E-9
score: 36.1 |
Blast
The following BLAST results are available for this feature:
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