TCONS_00015331-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015331-protein
Unique NameTCONS_00015331-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015331-protein ID=TCONS_00015331-protein|Name=TCONS_00015331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MVDSSSDNKILGKLSSAGWICDQRKEQWRKDGYMNCCGCKGQAYNPTDVE
QKANIITHGINIPFAVVAVYFMVIKSKDNLDLVCTLVYGTSLLMLFTVST
LFHVISLLPKWRESRLRKIFHLCDRFSIYIFISASYMPWLLLQRTIPNAH
DIVTLLWSIAAMGIVYSLVMHEKYKMLETAIYLCQGFGPAIFLIKHASTS
LFELALGGLLYVIGVIFFKSDGHLPFAHAIWHILGSIAAWVHHYGIWMYF
YAG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008577XLOC_008577Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015331TCONS_00015331Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004254AdipoR/HlyIII-related
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004254AdipoR/Haemolysin-III-relatedPFAMPF03006HlyIIIcoord: 52..242
e-value: 1.9E-19
score: 70.2

Blast
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BLAST of TCONS_00015331-protein vs. Swiss-Prot (Human)
Match: PAQRB (Monocyte to macrophage differentiation factor OS=Homo sapiens GN=MMD PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 1.166e-55
Identity = 100/227 (44.05%), Postives = 132/227 (58.15%), Query Frame = 0 
Query:   29 RKDGYMNCCGCKGQAYNPTDVEQKANIITHGINIPFAVVAVYFMVIKSKDNLDLVCTLVYGTSLLMLFTVSTLFHVISLLPKWRESRLRKI---FHLCDRFSIYIFISASYMPWLLLQRTIPNAHDIVTLLWSIAAMGIVYSLVMHEKYKMLETAIYLCQGFGPAIFLIKHASTS-LFELALGGLLYVIGVIFFKSDGHLPFAHAIWHILGSIAAWVHHYGIWMYFY 251
            R   +MN        Y PT  E  AN  TH   I  A+V    +   S D  + +   +YG  L  LF VST+FH++S    W++S LR +   FH+CDR  IY FI+ASY PWL L+   P A  +   +W +AA G +Y  + HEKYK++E   YL  GF PA+ +    +T  L ELA GGL+Y +GV+FFKSDG +PFAHAIWH+  + AA VH+Y IW Y Y
Sbjct:    6 RFQRFMNHRAPANGRYKPTCYEHAANCYTHAFLIVPAIVGSALLHRLSDDCWEKITAWIYGMGLCALFIVSTVFHIVS----WKKSHLRTVEHCFHMCDRMVIYFFIAASYAPWLNLRELGPLASHMRWFIWLMAAGGTIYVFLYHEKYKVVELFFYLTMGFSPALVVTSMNNTDGLQELACGGLIYCLGVVFFKSDGIIPFAHAIWHLFVATAAAVHYYAIWKYLY 228
The following BLAST results are available for this feature:
BLAST of TCONS_00015331-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PAQRB1.166e-5544.05Monocyte to macrophage differentiation factor OS=H... [more]
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