TCONS_00015219-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015219-protein
Unique NameTCONS_00015219-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length808

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015219-protein ID=TCONS_00015219-protein|Name=TCONS_00015219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=808bp
MAAVPLALKIPESISTNSTNGSINKDRAPKLHRPYSLSDSEDEKAEKKSE
VPPTSLLSVVSTLSTKDAMNLIYTNTFQKSPLAAFPYESSYNGAPDTLFR
GMPSLSNGIGRSPPPLEKMRREKAAGEDSVFANSPDPRSPFARVFDYNWS
NSVTDRKPLYENGSLPTSTSYDALLKANYEKMRFSVPFRDSPPISSAVGE
INPPSRSPTKARMKYTPMRENIFSDSLATTSGGVAKSPTMFFSRGSTEDR
KPYRRETDLVRSMNLHSAAASQYDLDHNPLKIIQSPSYQVKQRHLSESLP
DKRSSVSSAFSVIRPHFQRMYERESGYNSDPSEKGKKLFKPYETFEKSKI
YARRHSENYRPALNGNNGADIDKEIGVSRLHVSDEASKEALQAFDAHVQK
MMAEKSRLQGPAPIGSPKLASMSRPKEPMAIQCSTIDSSMPQTSTTLTNV
ADLSHGVGGLLGLTRIANEHLGQAIAKEKKRSKNNNCLHLWQFLRTVLEE
EKDKPNRCIEWTNRERGEFRLIKTAVIADLWGQSKNRKCMTYEKMARAMR
YYYKMKILEKVPHKRLHFRFGEKMLARVLDPNTIKPFRRMSTGDQHMRPA
NGTNGYYSGPPPPLQMLRRGSIDGLNSPGVISSYQGGRLGSQSDCPPTPM
TPLSPCTPMTPLTPCTPGVNRTPVIMSRSTNVFFPPDSPLPKLENYESKS
PPRNGRQNSPPTTYLQQQRLPQQSQPIKDEFNRNLPIKEEYNRNQPITEE
YNRNQPIKEEFNKNHPIKEEDDRLSESTATTTSKDGVASDNSINADEESD
SELIVDMD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008510XLOC_008510Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015219TCONS_00015219Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000418Ets_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000418Ets domainPRINTSPR00454ETSDOMAINcoord: 515..533
score: 35.83
coord: 488..501
score: 40.8
coord: 553..571
score: 35.45
coord: 534..552
score: 55.62
IPR000418Ets domainSMARTSM00413etsneu2coord: 487..575
e-value: 5.0E-34
score: 129.0
IPR000418Ets domainPFAMPF00178Etscoord: 489..570
e-value: 7.0E-29
score: 100.0
IPR000418Ets domainPROSITEPS50061ETS_DOMAIN_3coord: 488..571
score: 21.443
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 474..585
e-value: 1.5E-30
score: 104.9
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 478..574
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 680..808
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 586..610

Blast
[Close]
BLAST of TCONS_00015219-protein vs. Swiss-Prot (Human)
Match: EHF (ETS homologous factor OS=Homo sapiens GN=EHF PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.471e-21
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0 
Query:  476 AKEKKRSKNNNCLHLWQFLRTVLEEEKDKPNRCIEWTNRERGEFRLIKTAVIADLWGQSKNRKCMTYEKMARAMRYYYKMKILEKVPHKRLHFRFGE 572
            AK   +  N    HLW+F+R +L      P   I+W +R  G FR +K+  +A LWG+ KN   MTYEK++RAMRYYYK +ILE+V  +RL ++FG+
Sbjct:  195 AKCHTKKHNPRGTHLWEFIRDILLNPDKNPG-LIKWEDRSEGVFRFLKSEAVAQLWGKKKNNSSMTYEKLSRAMRYYYKREILERVDGRRLVYKFGK 290
The following BLAST results are available for this feature:
BLAST of TCONS_00015219-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EHF6.471e-2145.36ETS homologous factor OS=Homo sapiens GN=EHF PE=2 ... [more]
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