TCONS_00015172-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015172-protein
Unique NameTCONS_00015172-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1076

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015172-protein ID=TCONS_00015172-protein|Name=TCONS_00015172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1076bp
SDMMKILLLLFVTPYLAFGQRTIRCPFGLSTFSADSVNTYFQCQSNGVAT
LQSCPKNQFYWAKFGRCMELERQERNSTDVKYLNDVPVFGRNVQVGDLYN
AHADRIVSGENLFTQETIDRERHRTTRTGSSANLFSARTTSDRLDGMRMS
KRMSVSFLSGLLKTSGSGRFLYSASPTEDERTITFEHQITTHALSMKNNI
QPEGGVCDQDTEATHTVSSVTYGLDCWMTFRRMVKKNESRVGVDNRLRHF
ASKMAFYATMVDSQYTEEEREFLQDMKVEVYVDFATDSLGSLTYQQATRI
YKRLPTLLGNAPDYKSSKPVMMDIVPLSSFCDNGKHQKPKVVKEMGQSVQ
RTLMNFMQNLENFQSKAASMSIKDSILAFDDSNILRWFQIALSDKLKQLE
RYMNEIVPRVRSGDQSEREIINLMGDDWMYPFTLEKCKQFLNEREKEVEV
MENILDIFKYDHQQNTYDVTQQQQNDESAKQQQQQNVDIKATWRALESYV
KNDKLVAFNINVMSDVMDIERFLQPGRMEEKWWLSNETILYNMAQRARQF
KQFTDQNSAPQKSGYLVRFVRYRDDEPFSVFSFSGPQGQSKSEIFNIPIR
PEQPVEKEVGVDHITLGINKVPYGNSFYQSLVVFWKRQGSENYEQANKYD
IKDIHRNLEQIIIRNLNPSTDYEFQFAYDTEFGQSRLSEMSDVIRTKVAT
KPRNLRVVNNTNEEISLAWDEPSMMADNRSVVYYTVSMFRDNKTIRHLTV
ENREARFNRMTFMKMGEYKFQVVAMVTKMETSLPSEMLMVQKCPNPPREI
FLQEREYSFVALNWDQKNSDQMNNTNEDNQLEYIVYYAPRNENNNNGSID
SWKTIRTQFSGILLNDLKEDEKYIVKIKVSTNDCTSEFSRPLYFSTRQSN
QTESLMEQQMSNFTQKFTDEAERVHQSVQQMNQFMNEQIKNQTEMMMNQT
EILIQNLQFKVMKAIEDTTERSTGCKWTMGDGISRVELALNGEFENKWDC
YRACIKKSGHTRHQTINGATYGVKSGLNGKCFCEKEMRAIDGMDSRYLTC
RFAPVYNFDDNNKDDNQKKNNVQMNN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008499XLOC_008499Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015172TCONS_00015172Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR002557Chitin-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008061chitin binding
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1070..1076
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 699..782
e-value: 1.5
score: 17.9
coord: 794..887
e-value: 0.58
score: 19.2
coord: 598..685
e-value: 2.2
score: 17.1
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 600..699
score: 11.803
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 797..899
score: 7.188
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 701..796
score: 13.215
IPR003961Fibronectin type IIICDDcd00063FN3coord: 794..896
e-value: 1.16231E-5
score: 43.6391
IPR003961Fibronectin type IIICDDcd00063FN3coord: 701..786
e-value: 4.27105E-7
score: 48.2615
IPR003961Fibronectin type IIICDDcd00063FN3coord: 598..694
e-value: 8.61258E-5
score: 40.9427
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 598..790
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 767..898
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 796..911
e-value: 1.2E-8
score: 34.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 597..699
e-value: 1.7E-6
score: 27.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 700..795
e-value: 2.1E-8
score: 33.9
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 19..82
e-value: 6.7E-4
score: 19.0
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 33..68

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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