TCONS_00015133-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015133-protein
Unique NameTCONS_00015133-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length384

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015133-protein ID=TCONS_00015133-protein|Name=TCONS_00015133-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MALVDRTNVLKNKENIMVPNSNQIGLDLEKKMQKPMVSDVASIIAAKPAK
IDKDAQEEPLLRENPRRFVLFPIKYPDIWEMYKKAEASFWTAEEVDLAVD
VKHWQEKLKPQERYFISHVLAFFAASDGIVNENLVECFSQEVQIPEARAF
YGFQIAIENIHSEMYSLLIETLIEDPTERGNLFNAIETMPCIQKKAVWAL
KWINKERASYAERIIAFAAVEGIFFSGSFASIFWLKSRGVMPGLTFSNEL
ISRDEGLHCDFACLMFKHLVNKPSEEKVKEIILDAVRIEQEFLTESLPCD
LLGMNKGLMKTYIEFVADRLLLALGCSKIWHRENPFDFMENISLGRKANF
FESRVSDYQKSGVMESLNDTGKDLQFDELDDLDF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008473XLOC_008473Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015133TCONS_00015133Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000358RNR_small_fam
IPR030475RNR_small_AS
IPR033909RNR_small
IPR009078Ferritin-like_SF
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009263deoxyribonucleotide biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009263 deoxyribonucleotide biosynthetic process
biological_process GO:0055114 oxidation-reduction process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000358Ribonucleotide reductase small subunit familyPFAMPF00268Ribonuc_red_smcoord: 67..335
e-value: 7.0E-122
score: 406.2
NoneNo IPR availableGENE3D1.10.620.20coord: 22..349
e-value: 6.8E-125
score: 416.0
IPR030475Ribonucleotide reductase small subunit, acitve sitePROSITEPS00368RIBORED_SMALLcoord: 157..173
IPR033909Ribonucleotide reductase small subunitCDDcd01049RNRR2coord: 68..344
e-value: 5.7844E-133
score: 384.284
IPR009078Ferritin-like superfamilySUPERFAMILY47240Ferritin-likecoord: 50..341

Blast
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BLAST of TCONS_00015133-protein vs. Swiss-Prot (Human)
Match: RIR2 (Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens GN=RRM2 PE=1 SV=1)

HSP 1 Score: 519.235 bits (1336), Expect = 0.000e+0
Identity = 256/366 (69.95%), Postives = 293/366 (80.05%), Query Frame = 0 
Query:   25 GLDLEKKMQKPMVSDVASIIAAKPAK-------------IDKDAQEEPLLRENPRRFVLFPIKYPDIWEMYKKAEASFWTAEEVDLAVDVKHWQEKLKPQERYFISHVLAFFAASDGIVNENLVECFSQEVQIPEARAFYGFQIAIENIHSEMYSLLIETLIEDPTERGNLFNAIETMPCIQKKAVWALKWINKERASYAERIIAFAAVEGIFFSGSFASIFWLKSRGVMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEEKVKEIILDAVRIEQEFLTESLPCDLLGMNKGLMKTYIEFVADRLLLALGCSKIWHRENPFDFMENISLGRKANFFESRVSDYQKSGVMESLNDTGKDLQFD 377
            GL L  K   P       ++A+K A+                  ++EPLLRENPRRFV+FPI+Y DIW+MYKKAEASFWTAEEVDL+ D++HW E LKP+ERYFISHVLAFFAASDGIVNENLVE FSQEVQI EAR FYGFQIA+ENIHSEMYSLLI+T I+DP ER  LFNAIETMPC++KKA WAL+WI  + A+Y ER++AFAAVEGIFFSGSFASIFWLK RG+MPGLTFSNELISRDEGLHCDFACLMFKHLV+KPSEE+V+EII++AVRIEQEFLTE+LP  L+GMN  LMK YIEFVADRL+L LG SK++  ENPFDFMENISL  K NFFE RV +YQ+ GVM S  +    L  D
Sbjct:   24 GLSLVDKENTPPALSGTRVLASKTARRIFQEPTEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHW-ESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENSFTLDAD 388
The following BLAST results are available for this feature:
BLAST of TCONS_00015133-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RIR20.000e+069.95Ribonucleoside-diphosphate reductase subunit M2 OS... [more]
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