TCONS_00015108-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015108-protein
Unique NameTCONS_00015108-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length351

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015108-protein ID=TCONS_00015108-protein|Name=TCONS_00015108-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
MSEKKDNLSCVLYGAGDMRLEQRGVPKPKDDEVLLSMHSVGICGSDIHYY
KHGRIGNFVVNKPMVMGHEASGTVVACGKDVKHLKKGDRVAIEPGVPCRK
CIRCKSGRYNLCPDIFFCATPPDDGNLCRFYTHAADFCYRLPDHVTFEEG
ALLEPLSVGIYACQRASVTNGDRILICGAGPIGLVTLLAAKSSGASEVAI
TDLDEGRLSMAKQLGADVTIRIQSKDGREVAKQIESVFGESDKTIECTGV
ESSITSAILATRCGGTLVIVGSGTGDSTIPLNTARRKEIDIRGVFRYANC
YPVALNMVASGQINVKLLVTHRFALEDSHDAFRTSASNKDGAIKVMIKCS
K
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008467XLOC_008467Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015108TCONS_00015108Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013154ADH_N
IPR013149ADH_C
IPR002328ADH_Zn_CS
IPR016040NAD(P)-bd_dom
IPR011032GroES-like
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020843Polyketide synthase, enoylreductase domainSMARTSM00829PKS_ER_names_modcoord: 14..347
e-value: 0.0019
score: -131.5
NoneNo IPR availableGENE3D3.40.50.720coord: 172..295
e-value: 9.6E-26
score: 90.0
NoneNo IPR availableGENE3D3.90.180.10coord: 2..171
e-value: 2.6E-48
score: 163.5
NoneNo IPR availableCDDcd05285sorbitol_DHcoord: 9..349
e-value: 0.0
score: 576.367
IPR013154Alcohol dehydrogenase, N-terminalPFAMPF08240ADH_Ncoord: 31..139
e-value: 9.7E-29
score: 99.3
IPR013149Alcohol dehydrogenase, C-terminalPFAMPF00107ADH_zinc_Ncoord: 181..308
e-value: 9.2E-20
score: 70.8
IPR002328Alcohol dehydrogenase, zinc-type, conserved sitePROSITEPS00059ADH_ZINCcoord: 67..81
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 144..314
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 8..179

Blast
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BLAST of TCONS_00015108-protein vs. Swiss-Prot (Human)
Match: DHSO (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4)

HSP 1 Score: 441.039 bits (1133), Expect = 1.157e-155
Identity = 209/349 (59.89%), Postives = 268/349 (76.79%), Query Frame = 0 
Query:    2 SEKKDNLSCVLYGAGDMRLEQRGVPKPKDDEVLLSMHSVGICGSDIHYYKHGRIGNFVVNKPMVMGHEASGTVVACGKDVKHLKKGDRVAIEPGVPCRKCIRCKSGRYNLCPDIFFCATPPDDGNLCRFYTHAADFCYRLPDHVTFEEGALLEPLSVGIYACQRASVTNGDRILICGAGPIGLVTLLAAKSSGASEVAITDLDEGRLSMAKQLGADVTIRIQSKDGREVAKQIESVFG-ESDKTIECTGVESSITSAILATRCGGTLVIVGSGTGDSTIPLNTARRKEIDIRGVFRYANCYPVALNMVASGQINVKLLVTHRFALEDSHDAFRTSASNKDGAIKVMIKC 349
            + K +NLS V++G GD+RLE   +P+P  +EVLL MHSVGICGSD+HY+++GRIGNF+V KPMV+GHEASGTV   G  VKHLK GDRVAIEPG P      CK GRYNL P IFFCATPPDDGNLCRFY H A FCY+LPD+VTFEEGAL+EPLSVGI+AC+R  VT G ++L+CGAGPIG+VTLL AK+ GA++V +TDL   RLS AK++GAD+ ++I  +  +E+A+++E   G + + TIECTG E+SI + I ATR GG LV+VG G+  +T+PL  A  +E+DI+GVFRY N +PVA++M+AS  +NVK LVTHRF LE + +AF T    K   +K+M+KC
Sbjct:    4 AAKPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFET--FKKGLGLKIMLKC 350
The following BLAST results are available for this feature:
BLAST of TCONS_00015108-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHSO1.157e-15559.89Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
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