TCONS_00015106-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015106-protein
Unique NameTCONS_00015106-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length819

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015106-protein ID=TCONS_00015106-protein|Name=TCONS_00015106-protein|organism=Clytia hemisphaerica|type=polypeptide|length=819bp
IYYLIDDLCYFFLLLDLKHYESLITEMSQKTTTLIQHIKALGLSQKECAK
VIEYLNDYAEDKSVVNLVKKLISLLQPVEYLSLLKDIRHSIRQKDQPYFD
KLINIYLYGNDASQNNHSHRKTHSALNATEPRYVTSHGNKWSFKVINIEK
VSGNVGLFLCGKIESIPGLKVGYIDEGSIAHTKGVKKGDYIIEVNGKSME
KISLKTALAVLPLLTSLKLIIKRPEKIIKTLSTSLNPWTKEKIYPTTTSA
SYTTVKSPSQQTIKLVRKSFKDSIGFSIRGGNEYLSPIYVSGVDKFSIAE
SSGLKVGDCILSINGKDCRGLNHHEAVQFIQNNSHLTFKVKRNNSKTRSI
SHQSSRYCTLQPKASDKTCVSKSMENLSHQPKPFKSSTLRWKSTSDLYTT
ITPKEMEMDTRRYEKRWRNLLTVNEYTILKALLSHYKKNKDVESLVLNVV
QSFNRNTRLELLNDIRNLVRDEHVERYDDLIRSQFDGTFFKTRSNNHALE
RHNTMPASLSKLWFQSNENGDVNDGFPTSTPRQRPRNNVVDNSGHSTDPR
SVSASSGYRGNRYHTMNERNRHPRNDFFDYAPPRSHSVEQREHSDRPTHL
KTKRERDQQRSKSLKARNECHYRESSIDSSFNTETNWILKKPNDNQQRHQ
NTSYTASSRRHVGEIFPTVGDDVRSFEMDSSPHRSYAEHDQNNNANNYSP
SGLFHAQSFKVNPIHQEDHTSTGYLQYQNDSPLSHRRHKSVPDLSNVDHY
RSSSFSRSPSYKDHIAAHNLDIQVAPQKPTRGRPMKLSDDQNKYTIQLGS
SSMTIESVTVHKPSQITRV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008466XLOC_008466Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015106TCONS_00015106Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 153..225
e-value: 3.6E-10
score: 49.8
coord: 272..344
e-value: 1.1E-19
score: 81.4
IPR001478PDZ domainPFAMPF00595PDZcoord: 271..340
e-value: 6.3E-14
score: 52.0
coord: 151..211
e-value: 3.0E-6
score: 27.4
IPR001478PDZ domainPROSITEPS50106PDZcoord: 145..211
score: 12.044
IPR001478PDZ domainPROSITEPS50106PDZcoord: 262..332
score: 15.843
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 140..227
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 244..347
NoneNo IPR availableGENE3D2.30.42.10coord: 127..235
e-value: 8.6E-11
score: 41.3
NoneNo IPR availableGENE3D2.30.42.10coord: 239..347
e-value: 2.0E-21
score: 75.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 673..703
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 639..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..627
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 144..211
e-value: 1.89453E-10
score: 57.5767
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 266..341
e-value: 1.55257E-22
score: 92.2446

Blast
[Close]
BLAST of TCONS_00015106-protein vs. Swiss-Prot (Human)
Match: PDZD7 (PDZ domain-containing protein 7 OS=Homo sapiens GN=PDZD7 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.342e-20
Identity = 67/223 (30.04%), Postives = 116/223 (52.02%), Query Frame = 0 
Query:  146 INIEKV-SGNVGLFLCGKIESIPGLKVGYIDEGSIAHTKGVKKGDYIIEVNGKSMEKISLKTALAVLPLLTSLKLIIKRPEKI--IKTLSTSLNPWT-----KEKIYPTTTSASYTTVKSPSQQTIKLVRKSFKDSIGFSIRGGNEYLSPIYVSGVDKFSIAESSGLKVGDCILSINGKDCRGLNHHEAVQFIQNNSHLTFKVKRNNSKTRSISHQSSRYCTL 360
            + +EK  +G +G  + G  E   G+ V  ++EGS A   G+  GD I EVNG S+E  ++ +A+ VL   + L ++++R  ++  IK  S     W      +  +    ++ S T+ +   ++ + L   S    +GF+IRGG E+   IYVS VD   +AE +G+KVGD +L+ NG     ++H +AV+ ++  +H+   +K    +  +     S YC L
Sbjct:   87 VRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMMVRRMGRVPGIK-FSKEKTTWVDVVNRRLVVEKCGSTPSDTSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVSKVDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIK-ETGRYPAYKEMVSEYCWL 307
The following BLAST results are available for this feature:
BLAST of TCONS_00015106-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDZD72.342e-2030.04PDZ domain-containing protein 7 OS=Homo sapiens GN... [more]
back to top