TCONS_00015051-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015051-protein
Unique NameTCONS_00015051-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1098

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015051-protein ID=TCONS_00015051-protein|Name=TCONS_00015051-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1098bp
MMANFKLMPDPLDIREITFSNLLLLGFDVEEKEAQYRIPFTRDMFSVPNR
KAMEVVFHFLFCKLNADSAKESFRHCWPIVDKKKEQDFRKVCSEWLTRIK
RDDSESRLPTMASSLLLSPTGDRFYQFLFYFSTYVLRQRISALPSKYGAL
SAWPSLTTTNRKYIPQILRALIVTSINKKASLIDFMETIVNTKEEWSTFS
RELSKEQRKLSKTKREYEKQQKQLQQFHEDVFGKGNFISSKDALRRTQNL
QKITEFWKTISTLFEAGKSLEEILESVLNSSNKSLKGEDIHFKIPDILLR
ECERKLQTGKRYKNVYEGGKINLNSLIQLWNLSLHLIKEAYGQYPLPNVE
HDEGYIRAHNHANSLNRTVTFNNTLGQKVLPDLKMSIEELKERIAESAEI
SSNQKPKTPGFPNKFNLDFLPATPPVRFQFNSQSAQRSATTDGAKFSSRN
FQETPAAVDMLLHQFKKNTSMNMDQQDDTPVRGLPHKRTSQTAQKKKDGA
FTQEKVMTTQKAPRSTRKAVVNKENKAPFTRAPVSEVKPPSSRQSTSSKI
PIPKQVPPPTKTPSKPKQITELDGLLAKTPKAQQLLIDEIAQSVLNNTQP
DDLSSSDTEENQSQNVHALDEPMEAFSTGAFESRDKVPRTPAFKSKIHNR
RSPSRTSPRNIEESPMRTKESPVYTKESPSLSPTEHTQHHGYSEPTIAED
EKDLLQNLSSVVSENVFNLKALQERLRNITAVKETTPRQESEQLDNSTFE
NLTTNLQSMNINSTTTPYHGKPNTLAGFIDINPITPSNVQSVLTDYNPIT
PLRLPSSSSDEETPSNHHRSAHTPSISNDVDFTPIKTPWRKEPNGLNTPT
DSVRNTFSITGEVDFTPLKTPWRKDSPNPKSTTDLNSPVSISSQTTEDLL
SFTPFAKNETSVKPKSKLDLFLENNRNVLKDIGTVELTKKNIQKVDAMQS
LLDDSTPVNSKTNRNNKADIDEFKRNNMIDFLTPFKSPVDQGHTKKMTSP
SGSMTSPRLNISSQDVDDFIDEVMINTSRTPKAFSSLTKSMGGFQSTTKT
PGFLAKTPGLFDDDEGPSFNTNDYTLMTPGYKSAGPFKLDFSDEDDEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008421XLOC_008421Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015051TCONS_00015051Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028163HAUS_6_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 628..693
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 868..890
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 800..854
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 984..1010
IPR028163HAUS augmin-like complex subunit 6, N-terminalPFAMPF14661HAUS6_Ncoord: 19..257
e-value: 1.7E-53
score: 181.5

Blast
[Close]
BLAST of TCONS_00015051-protein vs. Swiss-Prot (Human)
Match: HAUS6 (HAUS augmin-like complex subunit 6 OS=Homo sapiens GN=HAUS6 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.939e-26
Identity = 86/318 (27.04%), Postives = 148/318 (46.54%), Query Frame = 0 
Query:   43 DMFSVPNRKAMEVVFHFLFCKLNADSAKESFRHCWPIVDKKKEQDFRKVCSEWLTRIKRDDSESRLPTMASSLLLSPTGDRFYQFLFYFSTYVLRQRISALPSKYGALSAWPSLTTTNRKYIPQILRALIVTSINKKASLIDFMETIVNTKEEWSTFSRELSKEQRKLSKTKREYEKQQKQLQQFHEDVFGKGNFISSKDALRRTQNLQKITEFWKTISTLFEAGKSLEEILESVLNSSNK-SLKGEDIHFKIPDILLRECER---KLQTGKRYKNVYEGGKINLNSLIQLWNLSLHLIKEAYGQYPLPNVEHDEGYI 356
            +MF   NR A  ++ +FLF  L+    KE F+ CWP  D+K + +FRK C EW+ RI   +  S  P +  SL LSP G +F   +++F+ +V  + I +        S+   + T N K  PQ L   I      ++  +  ++      +++   ++   K+ R L       E Q K+++ +              D     + +QK+   W +++      +   E++ SVL+  N+ +L G ++   IP +LL + E+   +L  G    NVYE GK+NL ++IQL N  L ++K    Q     +  D  Y+
Sbjct:   44 NMFDKLNRDAFHIISYFLFQVLDQSLTKEVFKFCWPPFDQKSDTEFRKHCCEWIKRIS-GECGSSFPQVVGSLFLSPGGPKFIHLMYHFARFVAMKYIKSNSKN----SSHHFVETFNIK--PQDLHKCIARCHFARSRFLQILQRQDCVTQKYQENAQLSVKQVRNLRSECIGLENQIKKMEPY-------------DDHSNMEEKIQKVRSLWASVNETLMFLEKEREVVSSVLSLVNQYALDGTNVAINIPRLLLDKIEKQMFQLHIG----NVYEAGKLNLLTVIQLLNEVLKVMKYERCQADQARLTVDLHYL 337
The following BLAST results are available for this feature:
BLAST of TCONS_00015051-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HAUS63.939e-2627.04HAUS augmin-like complex subunit 6 OS=Homo sapiens... [more]
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