TCONS_00014901-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014901-protein
Unique NameTCONS_00014901-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length664

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014901-protein ID=TCONS_00014901-protein|Name=TCONS_00014901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=664bp
MLSSNICKVIRQGHIKNATGLFNQTLNNTIAKRSAWTAVELGRDPKELRA
KYPKPSFDVDKLTEVLDHDNHQMRKEMREFLSDPSMRPKYNISLEEERDV
ALERLQKICDKGFISVLDFKNNPLKIFAAHELASIVDPAMSTKMTVQFNL
FGGTVLKLGTERHHAKLLEGIDNLQDVGCFGLTELGYGNNAVEMETTAVY
DKSAKEFIINTPTPLAQKYWITNGAVHAKHCVVFAQLQVGDDEHGIHGFL
VPIRDNDLKPLPGVTVEDMGYKMGVNGVDNAKLSFDNVRVPLVNLLNRYS
DVAEDGTFTTEIKSNRGRFLTVADQLLSGRLCIAAMSQGGAKTALAVALR
YSATRLTVGASGKSDTPILDYQLQQRALIPLLAETICLNIGLDYIKDRWA
FQKEDGSEHPEVVTMCCVIKPLCGWNVENVGTVCRERTGGQGYLSVNRLG
TVITSSHASMTAEGDNCVLMQKVAKERLSEYSKSDIMKTFLASQVPTGML
SVPNFDSLDYLHNLMKKREDLLYMELGRKMFKAGRSKPFETWMFDSSDLI
QHAARAYGERLVSQVCLDTKGKSDTSLHDILEKLHKLYLVNIIEQNLGWF
LSKRLIPTWAAKKVPDVAAKLCKEISPQSLAITDAFALTDDMISAPIALD
WIKYNEVDNQGELV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008331XLOC_008331Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014901TCONS_00014901Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR002655Acyl-CoA_oxidase_C
IPR009075AcylCo_DH/oxidase_C
IPR012258Acyl-CoA_oxidase
IPR013786AcylCoA_DH/ox_N
IPR009100AcylCoA_DH/oxidase_NM_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006635fatty acid beta-oxidation
GO:0006631fatty acid metabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0003997acyl-CoA oxidase activity
GO:0071949FAD binding
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005777 peroxisome
molecular_function GO:0003997 acyl-CoA oxidase activity
molecular_function GO:0071949 FAD binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006091Acyl-CoA oxidase/dehydrogenase, central domainPFAMPF02770Acyl-CoA_dh_Mcoord: 179..288
e-value: 6.7E-19
score: 67.8
NoneNo IPR availableGENE3D1.20.140.10coord: 509..637
e-value: 1.5E-21
score: 76.3
NoneNo IPR availableGENE3D2.40.110.10coord: 178..289
e-value: 3.1E-27
score: 94.3
NoneNo IPR availableGENE3D1.20.140.10coord: 290..489
e-value: 2.9E-34
score: 117.7
IPR002655Acyl-CoA oxidase, C-terminalPFAMPF01756ACOXcoord: 533..647
e-value: 3.2E-16
score: 59.3
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 322..475
e-value: 7.2E-5
score: 22.9
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 318..483
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 504..648
IPR012258Acyl-CoA oxidasePIRSFPIRSF000168Acyl-CoA_oxidasecoord: 41..659
e-value: 1.0E-134
score: 448.4
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalGENE3D1.10.540.10coord: 58..175
e-value: 3.1E-24
score: 85.0
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domainSUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 62..301

Blast
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BLAST of TCONS_00014901-protein vs. Swiss-Prot (Human)
Match: ACOX3 (Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 2.290e-81
Identity = 164/439 (37.36%), Postives = 240/439 (54.67%), Query Frame = 0 
Query:   88 PKYNISLEEERDVALERLQKICDKGFISVLDFKNNPLKIFAAHELASIVDPAMSTKMTVQFNLFGGTVLKLGTERHHAKLLEGIDNLQDVGCFGLTELGYGNNAVEMETTAVYDKSAKEFIINTPTPLAQKYWITNGAVHAKHCVVFAQLQV-GDDEHGIHGFLVPIRD-NDLKPLPGVTVEDMGYKMGVNGVDNAKLSFDNVRVPLVNLLNRYSDVAEDGTFTTEIKSNRGRFLTVADQLLSGRLCIAAMSQGGAKTALAVALRYSATRLTVGASGKSDTPILDYQLQQRALIPLLAETICLN-----IGLDYIK--------DRWAFQKEDGSEHPEVVTMCCVIKPLCGWNVENVGTVCRERTGGQGYLSVNRLGTVITSSHASMTAEGDNCVLMQKVAKERLSEYSKSDIMKTFLASQVPTGMLSVPNFDSLDYL 511
            P  ++SLE+ R++   R ++I +  F+SV D   +PLK+ A  +   + D +++ K  +   +FG  V   G+ERH    ++ I  ++  GCF LTEL +G+N   + TTA YD + +EFII++P   A K+W+ N    A H VVFA+L V GD  HG+H F+V IRD   L P+PGV V D+G K+G NG+DN    F  VRVP  +LLNR  DV  +GT+ +  K  R RF      L SGR+ I +++    K A+A+ALR+SATR   G + + + P+L+Y +QQ  L+P LA    L+     + LD ++        DR A Q E G    E+  +    KPL  W  +     CRE  GG GYL++NRLG +   +  + T EGDN +L+Q+           S+ +   LA QV  G        S+D+L
Sbjct:   65 PGADLSLEKYRELNFLRCKRIFEYDFLSVEDMFKSPLKVPALIQCLGMYDSSLAAKYLLHSLVFGSAVYSSGSERH-LTYIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSIVSLAILNLKLAVAIALRFSATRRQFGPTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSARQAELGR---EIHALASASKPLASWTTQQGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYEGDNNILLQQT----------SNYLLGLLAHQVHDGACFRSPLKSVDFL 489
The following BLAST results are available for this feature:
BLAST of TCONS_00014901-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACOX32.290e-8137.36Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapi... [more]
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