TCONS_00014782-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014782-protein
Unique NameTCONS_00014782-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1012

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014782-protein ID=TCONS_00014782-protein|Name=TCONS_00014782-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1012bp
MEERECLSSNIATSQDEEKTTRTISSYGIAINTEDLSKADVDKEDYQGLQ
ALGINAYEQEDLENEVINQVNTAVSKAESNFHQHATEAEIKNICDEIILL
EKDIKEIETVFVAAKSGDLEASRKISFSLLQRKTGKESRLKLLQNSLKEE
QEKLEILKSDSNTPATKQLAERDKLIQTGEITPFDAINLKNAANNVCGSI
TLDSIVDKYSQIKMRGRKKTSLPVYKEPTPIIPKISKSKELKTTRAFDAR
PPVTSDKPLCKRNEKKNVFIKESEDEEIDDERDEDFVPSENEFTEEEEKE
FFEDIDQNEVDDLKAAKSGRKRSSKVVAKEKGTKEKKKDKIIDDGDFESY
RERIRKHNLKEKLKEKIRKGEANEDDFDIEFSSDDDGEEGVIESENDEVT
IQDDFTLPKKMWRKLYRYQRVGVKWLWQLHQQQVGGIIGDEMGLGKTIQM
ITFLHGLSNQMKRDRSTKGLGATLVVCPGTVLHQWVAEFHKWAPTFRVAI
LHDSGSFVGRKEALIKTINNHKGGILVTTYAGVRINKKELYRYKWHYVVL
DEGHKIRNPDSEVTMAVKQIDTPHRIILTGTPMQNSLKELWSLFDFVFPG
RLGTLPVFMAEFSVPITMGGYANATPVQVQTAHRCATVLKDTINPYMMRR
LKKDVKMAINLPQKNEQVLFCKLTEAQKDMYEKYIKSPEVTNILQGRMKV
FPGLIKLRKICNHPDLAFFEHNNSEDNDNDNITKSSDCGYWERSGKMLVV
ESLLKMWKEKKHRVLLFSQSKQMLDIMELFLKKFSYTYLRMDGETNIGSR
QVVVKNFTQNTSIFVFLLTTRVGGLGLNLTAADRIIIFDPDWNPSTDTQA
RERAWRIGQDKHVTIYRLMTTGTIEEKIYHRQIFKQFLTNRVLANPFQRR
FFKSNDLYELFSLDDIGPMQSTETGAIFAGTGSEIRMRGKKSKTKQTRVK
NEISDQTAAKNHNGVASEAIALGKQDKNDTNKQDIQTVVKEMKKSKKEKK
QRKRRKSXSNSC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008274XLOC_008274Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014782TCONS_00014782Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR000330SNF2_N
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 982..1002
NoneNo IPR availableCOILSCoilCoilcoord: 133..160
NoneNo IPR availableGENE3D3.40.50.10810coord: 381..649
e-value: 2.4E-56
score: 190.1
NoneNo IPR availableGENE3D3.40.50.300coord: 731..896
e-value: 7.5E-34
score: 116.0
NoneNo IPR availableCDDcd00079HELICccoord: 740..866
e-value: 8.37504E-30
score: 115.413
NoneNo IPR availableCDDcd00046DEXDccoord: 435..582
e-value: 3.42617E-21
score: 90.8596
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 775..858
e-value: 2.2E-21
score: 87.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 750..858
e-value: 3.9E-19
score: 69.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 749..908
score: 18.297
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 411..608
e-value: 5.9E-29
score: 112.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 427..600
score: 21.267
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 427..716
e-value: 6.7E-69
score: 232.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 391..650
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 657..920

Blast
[Close]
BLAST of TCONS_00014782-protein vs. Swiss-Prot (Human)
Match: ERC6L (DNA excision repair protein ERCC-6-like OS=Homo sapiens GN=ERCC6L PE=1 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 3.715e-107
Identity = 208/580 (35.86%), Postives = 327/580 (56.38%), Query Frame = 0 
Query:  389 EGVIESENDEVT--IQDDFTLPKKMWRKLYRYQRVGVKWLWQLHQQ-QVGGIIGDEMGLGKTIQMITFLHGLSNQMKRDRSTKGLGATLVVCPGTVLHQWVAEFHKWAPTFRVAILHDSGSFVGRKEALIKTIN--NHKGGILVTTYAGVRINKKELYRYK-----WHYVVLDEGHKIRNPDSEVTMAVKQIDTPHRIILTGTPMQNSLKELWSLFDFVFPGRL-GTLPVFMAEFSVPITMGGYANATPVQVQTAHRCATVLKDTINPYMMRRLKKDVKM------------------AI----NLPQKNEQVLFCKLTEAQKDMYEKYIKSPEVTNILQGRMKVFPGLIKLRKICNHP-----------DLAFF---EHNNSEDN-DNDNITKSSDCGYWERSGKMLVVESLLKMWKEKKHRVLLFSQSKQMLDIMELFLKKFSYTYLRMDGE-TNIGSRQVVVKNFTQNTSIFVFLLTTRVGGLGLNLTAADRIIIFDPDWNPSTDTQARERAWRIGQDKHVTIYRLMTTGTIEEKIYHRQIFKQFLTNRVLA---NPFQRRFFKSNDLYELFSLDDI 916
            E + E  +DE T        L +++  +L+ +Q+ G+ +L+ L++  + GGI+ D+MGLGKT+Q+I FL G+ +          +   L++ P  +++ WV EF KW P  RV   H        K+   + +N    + G+++TTY  +  N ++L  ++     W YV+LDE HKI+   ++  +  + I   +R++LTGTP+QN+L+ELWSLFDF   G L GTL  F  E+  PIT     +ATP +     + +  L   I PY +RR K+DV+                   AI    +L +KN+ +++ +L   Q+++Y K++    +  +L         L  L+K+C+HP           +L  F   + N  ED+ D D+I + +D    E SGKM+ +  LLK  +++ H+ L+FSQS+Q+L+I+E  LK   +  LR+DG  T++  R+  +  F QN    VFLLTT+VGG+GL LTAA R++IFDP WNP+TD QA +R +RIGQ ++V +YRL+T GT+EEKIY RQ+FK  L  +      NPF  R+F   +L ELF+++D+
Sbjct:   68 EELAEQGDDEFTDVCNSGLLLYRELHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMFD-------ASLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPS-----KDERTRNLNRIQQRNGVIITTYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACCLLNLGTFSAQDGNEGEDSPDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPF--RYFSKQELRELFTIEDL 633
The following BLAST results are available for this feature:
BLAST of TCONS_00014782-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERC6L3.715e-10735.86DNA excision repair protein ERCC-6-like OS=Homo sa... [more]
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