TCONS_00014773-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014773-protein
Unique Name	TCONS_00014773-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	795

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014773-protein ID=TCONS_00014773-protein|Name=TCONS_00014773-protein|organism=Clytia hemisphaerica|type=polypeptide|length=795bp
MKFGEHLGSQLTPEWKCQYVNYDELKKFLYEVEENAPSAEESNEEVLRRH
FMKHDEEFFVFCDNELRKINTFYAEKLAEALRRFGEIELEVANAGVERLQ
KVARSTSLFPDEQENYKQNVKLIQKRMKKDKKKLKELKAVVGEYYLSLVL
IQNYQQLNFTGFRKILKKHDKMWKTTSGVEYRQKKVENSGFYVNKQIDDL
INDTETIAIEDLENGDRSKAMDRLRVPPLHEQKRSDTNSSFLWGFFFGLL
VVLMFIVGISGYYKGYTQTAYYHQNIMASTITTTTPTTTVATLPWQQQKH
LMTNSTVRKDDGDSDNDDDDDDDDDSDGEDDDDDDDNDKIPSNKNKNPSK
NKQSMTGSNPHQDKQTFHLRWQPAVRMYRGMFLIILMIGLLGVNVHGWGN
AGVNHVLIFELDPRHHLNYVELLMLSSFLGVVWCISCIAFLFSNDFNIPV
FSNPLACGVFYLIFFLNPTKTFHYRARRWLLRILLRILRAPFCAVRFADF
WLADQLNSLVVALRDFQYFFCFYCYDWYNEGNEMCRDPRNIVRPFVAFLP
AWFRFAQCLRRYYDTRKGFPHLVNAGKYSTSMTITLISTIYSVYPESDGL
FTVWVISLIVGTCYTLFWDLKMDWGLFSPEAGENTFLREQIVYEYRIYYY
LAILADLIFRLMWTLTLSIGNYGWVHHEFFTFFIAICEVVRRFIWNYFRL
ENEHLNNVGEFRAVRDISIKPMVSKDEIKDTLTLEQIMDLEEGPIPRNKA
VKYLLDSAPPAPPSVVMGGSVMSAASRLTSRRSGSRKLSSVLKII

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008268	XLOC_008268	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014773	TCONS_00014773	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004331	SPX_dom
IPR004342	EXS_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..364
None	No IPR available	CDD	cd14477	SPX_XPR1_like	coord: 2..171 e-value: 2.19704E-59 score: 198.282
IPR004331	SPX domain	PFAM	PF03105	SPX	coord: 38..105 e-value: 1.1E-6 score: 28.7 coord: 98..183 e-value: 4.5E-10 score: 39.9 coord: 1..48 e-value: 1.6E-9 score: 38.1
IPR004331	SPX domain	PROSITE	PS51382	SPX	coord: 1..183 score: 27.155
IPR004342	EXS, C-terminal	PFAM	PF03124	EXS	coord: 375..705 e-value: 5.0E-99 score: 331.6
IPR004342	EXS, C-terminal	PROSITE	PS51380	EXS	coord: 534..731 score: 28.397

Blast

[Close]

BLAST of TCONS_00014773-protein vs. Swiss-Prot (Human)
Match: XPR1 (Xenotropic and polytropic retrovirus receptor 1 OS=Homo sapiens GN=XPR1 PE=1 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 2.155e-122
Identity = 197/395 (49.87%), Postives = 260/395 (65.82%), Query Frame = 0

Query:  373 PAVRMYRGMFLIILMIGLLGVNVHGWGNAGVNHVLIFELDPRHHLNYVELLMLSSFLGVVWCISCIAFLFSNDFNIPVFSNPLACGVFYLIFFLNPTKTFHYRARRWLLRILLRILRAPFCAVRFADFWLADQLNSLVVALRDFQYFFCFYCYD--W---------YNEGNEMCRDPRNIVRPFVAFLPAWFRFAQCLRRYYDTRKGFPHLVNAGKYSTSMTITLISTIYSVYPE---SDGL--FTVWVISLIVGTCYTLFWDLKMDWGLFSPEAGENTFLREQIVYEYRIYYYLAILADLIFRLMWTLTLSIGNYGWVHH--EFFTFFIAICEVVRRFIWNYFRLENEHLNNVGEFRAVRDISIKPMVSKDEIKDTLTLEQIMDLEEGPIPRNK 749
            P +R+YRG FL+I  + LLG+N +GW  AGVNHVLIFEL+PR +L++  L  ++ FLG++WC+S +A  F+    IP +  PLA   F + F +NPTKTF+Y++R WLL++L R+  APF  V FADFWLADQLNSL V L D +Y  CFY  +  W          +E + +C      VR  V  +PAW RF QCLRRY DT++ FPHLVNAGKYST+  +   + +YS + E   SD +  F +W++  I+ +CYTL WDLKMDWGLF   AGENTFLRE+IVY  + YYY AI+ D+I R  WT+ +SI +   + H  +      A  EV RRF+WN+FRLENEHLNN GEFRAVRDIS+ P+ + D+      LEQ+MD ++G   R K
Sbjct:  267 PLIRIYRGGFLLIEFLFLLGINTYGWRQAGVNHVLIFELNPRSNLSHQHLFEIAGFLGILWCLSLLACFFAPISVIPTYVYPLALYGFMVFFLINPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSLELKWDESKGLLPNNSEESGICHKYTYGVRAIVQCIPAWLRFIQCLRRYRDTKRAFPHLVNAGKYSTTFFMVTFAALYSTHKERGHSDTMVFFYLWIVFYIISSCYTLIWDLKMDWGLFDKNAGENTFLREEIVYPQKAYYYCAIIEDVILRFAWTIQISITSTTLLPHSGDIIATVFAPLEVFRRFVWNFFRLENEHLNNCGEFRAVRDISVAPLNADDQT----LLEQMMDQDDGVRNRQK 657

HSP 2 Score: 228.024 bits (580), Expect = 2.246e-64
Identity = 114/264 (43.18%), Postives = 170/264 (64.39%), Query Frame = 0

Query:    1 MKFGEHLGSQLTPEWKCQYVNYDELKKFLYEVEENAPSAEESNEEVLRRHFMKHDEEFFVFCDNELRKINTFYAEKLAEALRRFGEIELEVANAGVERLQKVARSTSLFPDEQENYKQNVKLIQKRMKKDKKKLKELKAVVGEYYLSLVLIQNYQQLNFTGFRKILKKHDKMWKTTSGVEYRQKKVENSGFYVNKQIDDLINDTETIAIEDLENGDRSKAMDRLRVPPLHEQKRSDTNSSFLWGFFFGLLVVLMFIVGISGYYK 264
            MKF EHL + +TPEW+ QY+ Y+  K  LY  ++ APS E ++E+ ++R+F K +E+FF  C+ EL KINTFY+EKLAEA RRF  ++ E+ ++    L     ST +    Q   ++ V  +    +   + +K+LK    E+YLSL+L+QNYQ LNFTGFRKILKKHDK+ +T+ G ++R   VE + FY  K+I+ LI++TE +   +LE+GDR KAM RLRVPPL   + +   ++F  G F G+ +VL   + ++  +K
Sbjct:    1 MKFAEHLSAHITPEWRKQYIQYEAFKDMLYSAQDQAPSVEVTDEDTVKRYFAKFEEKFFQTCEKELAKINTFYSEKLAEAQRRFATLQNELQSS----LDAQKESTGVTTLRQR--RKPVFHLSHEERVQHRNIKDLKLAFSEFYLSLILLQNYQNLNFTGFRKILKKHDKILETSRGADWRVAHVEVAPFYTCKKINQLISETEAVVTNELEDGDRQKAMKRLRVPPLGAAQPAPAWTTFRVGLFCGIFIVLNITLVLAAVFK 258

The following BLAST results are available for this feature:

BLAST of TCONS_00014773-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014773-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
XPR1	2.155e-122	49.87	Xenotropic and polytropic retrovirus receptor 1 OS...	[more]

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TCONS_00014773-protein (polypeptide) - C. hemisphaerica