TCONS_00014674-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014674-protein
Unique Name	TCONS_00014674-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	849

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014674-protein ID=TCONS_00014674-protein|Name=TCONS_00014674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=849bp
LERKIRMSSSHFISNFRNSCVIQPRSPSTRLPTTVLERDSLDFANRISSG
IGRKTNPSTENVLNSYEATSSVLDQCKSPTGENSRNRLHQKSPTELKNLI
NDDDKFFSHLQALKKENKKTLNSLEKLYNMSIESNEDQANTGRYIMNDEK
VHSILARTKKHQESTKRRKPGTKQRSTHKDKSTDEKDELIDFEDQVLVDR
LEKSFQDCREKFQKRASPPGTASAEENHQSLSQSDEELGVDIERIKQQKM
DYYGKGYVGDEDEISSQSSEERDEDLDEQLRVTAPESHVNILPDKHERKS
FRGRSSSFDVIAGMWENFSVDEYAPYTKRDKDADKKWSPSITIPEPFQMT
IRDEIKARRKSKRIEQIEQEYFRKRLLEDMELQKRIHPTPVPPTTFLPLY
DEHREKEEKRREYIRDLSKQILKSTEKPFSFVKREEVKHEMRKVHTTVAE
MKKEKKMKEKQKFTANPYPEKLFGLTWADKLAEQDEYRKIKIKMRAQETL
AQSSLPLSMKTRSHSAKYYGSREGTKRVKEDLKKRKQKFQPEIHHDIPDF
EDLQNKFEEELHKRRSAKNRTICEPFDLQTGKIPERRSKFLNSVSKSNTS
CNTYSGYSPKFERTGRSQSRNNLSTTGNRSRSSSLSRTQQQTPPEVSHTE
TSKLRHERLRKSLEKTKQEELQLAVKLKKKQQELNELRKSVTLKAKAQDP
SRNRKKETKEKLKSFKMADHDRRKEYETYLQDVNEKLKDRPLLFERESQT
NARSKAHKRYEEILREAGIDGGTLDSFLQGETTSGGMISSGEDNGVTDSE
GEMDTVSNDGSYVGGDDSRRTESRLSDDESVDDEGAREYSEDEFEEDAD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008217	XLOC_008217	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014674	TCONS_00014674	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019579	UPF0564

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 550..570
None	No IPR available	COILS	Coil	Coil	coord: 660..690
None	No IPR available	COILS	Coil	Coil	coord: 434..454
None	No IPR available	COILS	Coil	Coil	coord: 110..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 693..723
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..656
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 770..849
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 511..535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..187
IPR019579	Uncharacterised protein family UPF0564	PFAM	PF10595	UPF0564	coord: 340..728 e-value: 4.0E-60 score: 203.7

Blast

[Close]

BLAST of TCONS_00014674-protein vs. Swiss-Prot (Human)
Match: F161B (Protein FAM161B OS=Homo sapiens GN=FAM161B PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 3.856e-42
Identity = 144/450 (32.00%), Postives = 236/450 (52.44%), Query Frame = 0

Query:  337 WSPSITIPEPFQMTIRDEIKARRKSKRI---EQIEQEYFR--KRLLEDMELQKRIHPTPVPPTTFLPLYDEHREKEEKRREYIRDLSKQILKSTEKPFSFVKREE-VKHEMRK---VHTTVAEMKKEKKMKEKQKFTANPYPEKLFGLTWADKLAEQDEYRKIKIKMRAQETLAQSSLPL-SMKTRSHSAKYYGSREGTKRVKEDLKKRKQKFQPEIHHDIPDFEDLQNKFEEELHKRRSAKNRTICEPFDLQTGKI--PERRSKFLNSVSKSNTSCNTYSGYSPKFERTGRSQ-SRNNLSTTGNRSRS-SSLSRTQQQTPPEVSHTETSKLRHERLRKSLEKTKQ--EELQLAVKLKKKQQELNELRKSVTLKAKAQDPSRNRKKETKEKLKSFKMADHDRRKEYETYLQDVNEKLKDRPLLFERESQTNARSKAHKRYEEILREAGID 770
            W+ SIT+P PF+MT+R+   AR+K++ +      EQE  R  ++  E+ E  ++    PVP   +LPLY E  E+ E RR+      K++L S+ KPFSF+++EE +K   R+     T  A++ K+K  +          P+ +      DKL E + +RKI+I+MRA + L  +S P+ S   R++      +R  T++ K        +FQP ++  +PD+E L   F+    KRR  +  T  +PF L+T  +  P+R              C+  +        TGR Q S    +T   RSRS S L+     T P V  T+ ++ R   +R +LEK  +  E +Q     KKK Q ++   KSVTL+AKA DP ++ ++  K KLK  +  D  R KEY+  L+++ ++++ RP LFE+ ++  A+ +A + Y + L++AG++
Sbjct:  165 WASSITVPRPFRMTLRE---ARKKAEWLGSPASFEQERQRAQRQGEEEAECHRQFRAQPVPAHVYLPLYQEIMERSEARRQAGIQKRKELLLSSLKPFSFLEKEEQLKEAARQRDLAATAEAKISKQKATRR--------IPKSILEPALGDKLQEAELFRKIRIQMRALDMLQMASSPIASSSNRANPQPRTATR--TQQEKLGFLHTNFRFQPRVNPVVPDYEGLYKAFQRRAAKRRETQEATRNKPFLLRTANLRHPQR-------------PCDAAT--------TGRRQDSPQPPATPLPRSRSLSGLASLSANTLP-VHITDATRKRESAVRSALEKKNKADESIQWLEIHKKKSQAMS---KSVTLRAKAMDPHKSLEEVFKAKLKENRNNDRKRAKEYKKELEEMKQRIQTRPYLFEQVAKDLAKKEAEQWYLDTLKQAGLE 576

The following BLAST results are available for this feature:

BLAST of TCONS_00014674-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014674-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
F161B	3.856e-42	32.00	Protein FAM161B OS=Homo sapiens GN=FAM161B PE=1 SV...	[more]

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TCONS_00014674-protein (polypeptide) - C. hemisphaerica