TCONS_00014453-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014453-protein
Unique NameTCONS_00014453-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length868

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014453-protein ID=TCONS_00014453-protein|Name=TCONS_00014453-protein|organism=Clytia hemisphaerica|type=polypeptide|length=868bp
MFLSSTRRMFTLRNQMMCVYDTMVPLKRQYQTATICHGKFTKFVRSLLPK
RKVQKKIEGNPLEPNNVKHGKKRPLGNTVNGEKNLSNKTKKVIRKRKTPK
ILQRSQESSADNIPDYLYTTKSKNKNSNHKLPDIQFEPYISEDEYLRKLE
DESVITGVIRINPRNFRLAYIGSQNGVDRDIVIESVESRNRALPGDIVAV
QILPKDEWRDEGTTKTGKVVYLVEKKHTRTACGMLRPYRNHRFGFALFSP
VDRRLPRVMIPLSKCPENFVVNANKFDKTLFVGNIESWDEKMPFASGCVV
KNLGESGLIEPETEAILINNDIDSSDFSSEVLKELPDPEKWRVTKKEIAK
RRDLRDHCIFSVDPATARDLDDALSCRKINDDTFEVGVHIADVSHFIREG
SVLDKTARDRATSVYLTQQVIPMLPSVLCEELCSLNPGVERLAYSVIWTL
KSNGTKLDEWFGRSVIRSCTKLSYNHAQQMIETDNPASLQPNDFPEIHDK
RITLQQISQTVKHLYGIAKNLRDQRFSSGALDFSESDIAFNIDHSTGMPN
GCSLYEYKDSNKMIEEFMLLANMAVGDEIFKHFPKRAVLRCHPPPLQVLI
EQVESLCRKFDIPFDASDSSHLNKSLNDINKLDMEQNAEDIDEKDKKLFS
PALNLLCMKSFKNAKYFCTGSVEDESQYRHYALNVPIYTHFTSPIRRYPD
ILVHRLLTAALDQSFNFRAKSKQLQIWADHCTAKKLNADMASEQSSALFF
AVYVMEHGPLVEKGVIVNVSQASVDILCPQTGTMSRVYLRDVEGIKDFKY
SLPDEKPLLELEWCPVQDDVIYQQNLTMFTPVNIELKVNRNEPTKVVGTL
LNPNAMSGNESLKDQSLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008079XLOC_008079Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014453TCONS_00014453Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022966RNase_II/R_CS
IPR028591DIS3L2
IPR012340NA-bd_OB-fold
Vocabulary: Molecular Function
TermDefinition
GO:00001753'-5'-exoribonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0034427nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
molecular_function GO:0000175 3'-5'-exoribonuclease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00955RNB_2coord: 351..713
e-value: 2.7E-132
score: 455.5
NoneNo IPR availablePFAMPF00773RNBcoord: 351..712
e-value: 1.3E-98
score: 330.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..83
IPR022966Ribonuclease II/R, conserved sitePROSITEPS01175RIBONUCLEASE_IIcoord: 680..704
IPR028591DIS3-like exonuclease 2HAMAPMF_03045DIS3L2coord: 53..856
score: 17.302
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 135..303
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 310..756

Blast
[Close]
BLAST of TCONS_00014453-protein vs. Swiss-Prot (Human)
Match: DI3L2 (DIS3-like exonuclease 2 OS=Homo sapiens GN=DIS3L2 PE=1 SV=4)

HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0
Identity = 296/632 (46.84%), Postives = 402/632 (63.61%), Query Frame = 0 
Query:  215 KTGKVVYLVEKKHTRTACGMLRPY--RNHRF--GFALFSPVDRRLPRVMIPLSKCPENFVVNANKFDKTLFVGNIESWDEKMPFASGCVVKNLGESGLIEPETEAILINNDIDSSDFSSEVLKELPDPEKWRVTKKEIAKRRDLRDHCIFSVDPATARDLDDALSCRKINDDTFEVGVHIADVSHFIREGSVLDKTARDRATSVYLTQQVIPMLPSVLCEELCSLNPGVERLAYSVIWTLKSNGTKLDEWFGRSVIRSCTKLSYNHAQQMIETDN---PASLQPNDFPEIHDKRITLQQISQTVKHLYGIAKNLRDQRFSSGALDFSESDIAFNIDHSTGMPNGCSLYEYKDSNKMIEEFMLLANMAVGDEIFKHFPKRAVLRCHPPPLQVLIEQVESLCRKFDIPFDASDSSHLNKSLNDINKLDMEQNAEDIDEKDKKLFSPALNLLCMKSFKNAKYFCTGSVEDESQYRHYALNVPIYTHFTSPIRRYPDILVHRLLTAALDQSFNFRAKSKQLQIWADHCTAKKLNADMASEQSSALFFAVYVMEHGPLVEKGVIVNVSQASVDILCPQTGTMSRVYLRDVEGIKDFKYSLPDEKPLLELEWCPV-QDDVIYQQNLTMFTPVNIELKV 838
            ++ KVVY++EKKH+R A G L+    +N      +ALFSP D R+PR+ +PL  CP++FV     +  TLF+  I  W E   FA G + K+LG++G IEPETE IL    +D SDFSSEVL+ LP    W +  +E +KRRDLR  CIF++DP+TARDLDDALSC+ + D  F+VGVHIADVS+F+ EGS LDK A +RATSVYL Q+V+PMLP +LCEELCSLNP  ++L +SVIWTL   G  LDEWFGR++IRSCTKLSY HAQ MIE+     PA   P   PE H      +++ Q V +L+GIAK LR QRF  GAL   +  +AF +DH TG+P GC +YEY++SNK++EEFMLLANMAV  +I + FP++A+LR HPPP   ++  +   C +  +P D S +  LNKSL               D+K        L  +C +  + A YFC+G ++D +Q+RHYALNVP+YTHFTSPIRR+ D+LVHRLL AAL            LQ  ADHC  +++ +    E S++LFFAV V E GPL  + +++ + + + D+L  + G   R+Y   +  ++   +    +KP L L W P   +    QQ +T+F+ V + L+ 
Sbjct:  231 RSAKVVYILEKKHSRAATGFLKLLADKNSELFRKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANTLFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKELPPISPE-HSS----EEVHQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFG----------DDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGYRERLDMAPDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVKESGPLESEAMVMGILKQAFDVLVLRYGVQKRIYCNAL-ALRSHHFQKVGKKPELTLVWEPEDMEQEPAQQVITIFSLVEVVLQA 846
The following BLAST results are available for this feature:
BLAST of TCONS_00014453-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DI3L20.000e+046.84DIS3-like exonuclease 2 OS=Homo sapiens GN=DIS3L2 ... [more]
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