TCONS_00014371-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014371-protein
Unique Name	TCONS_00014371-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	403

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014371-protein ID=TCONS_00014371-protein|Name=TCONS_00014371-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MFEDLRSWYQAEKKYTREVMNITATIHHNGSSTSPTPQSSPETSGPIAIF
FFTYYALVFISGSIGNIVIIASVVKYKRMKTVVNIFLVNLAISDLLFVTL
SIFDGIAFIADGKWLLGDAFCRIQGTMIEISYTVSVCTLTVVAAERYISI
CHPHRIKRTFQQAYNTCVFVWMFSVIFCSGLFYGYTTSPNDDGDVVCRND
YWSTESRLSFYIVHSILVYMVPLGVMCFSHWFISKALIRQKMRTFSTYSS
SIDQITKDVDETDVNKNESQASHIGGKLDGKKEWKRNVKQANKRMKVVRL
LLVVTIVFFVLWTPFIVVRLLKYFSVEINELLWRGTQLLIFGNTAVNCFI
YALMSPAFREAFKGIFCCAKRLRNKNYSTSRSFDISETVKRKTSINNKVI
YKV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008049	XLOC_008049	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014371	TCONS_00014371	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000276	GPCR_Rhodpsn
IPR017452	GPCR_Rhodpsn_7TM

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 281..301
None	No IPR available	GENE3D	1.20.1070.10		coord: 16..400 e-value: 2.0E-76 score: 256.5
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 293..381 coord: 25..245
IPR000276	G protein-coupled receptor, rhodopsin-like	PRINTS	PR00237	GPCRRHODOPSN	coord: 333..359 score: 27.11 coord: 50..74 score: 21.4 coord: 128..150 score: 29.47 coord: 162..183 score: 17.88 coord: 297..321 score: 31.06 coord: 83..104 score: 37.27 coord: 211..234 score: 19.51
IPR000276	G protein-coupled receptor, rhodopsin-like	PFAM	PF00001	7tm_1	coord: 65..351 e-value: 3.6E-47 score: 160.7
IPR000276	G protein-coupled receptor, rhodopsin-like	PROSITE	PS00237	G_PROTEIN_RECEP_F1_1	coord: 134..150
IPR017452	GPCR, rhodopsin-like, 7TM	PROSITE	PS50262	G_PROTEIN_RECEP_F1_2	coord: 65..351 score: 39.65

Blast

[Close]

BLAST of TCONS_00014371-protein vs. Swiss-Prot (Human)
Match: OX2R (Orexin receptor type 2 OS=Homo sapiens GN=HCRTR2 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 3.162e-32
Identity = 91/332 (27.41%), Postives = 154/332 (46.39%), Query Frame = 0

Query:   55 YALVFISGSIGNIVIIASVVKYKRMKTVVNIFLVNLAISDLLFVTLSIFDGIAFIADGKWLLGDAFCRIQGTMIEISYTVSVCTLTVVAAERYISICHPHRIKRTFQQAYNTCVFVWMFSVIF---------CSGLFYGYTTSPNDDGDVVCRNDYWSTESRLSFYIVHSILV-YMVPLGVMCFSHWFISKALIRQKMRTFSTYSSSIDQITKDVDETDVNKNESQASHIGGKLDGKKEWKRNVKQANKRMKVVRLLLVVTIVFFVLWTPFIVVRLLK-----YFSVEINELLWRG---TQLLIFGNTAVNCFIYALMSPAFREAFKGIFCC 368
            Y +VF+   IGN+++  +V K   M+TV N F+VNL+++D+L     +   +       W  G + C++   +  +S +VSV TL+ +A +R+ +ICHP   K T ++A N+ V +W+ S I          CS +F G     N        ++ W  E     Y +   LV YM PL +M  ++  I + L     R     SS + +  K +      +   Q +    ++         +KQ   R K  R+L++V +VF + + P  ++ +LK     +   E  E ++     +  L++ N+A N  IY  +S  FRE FK  F C
Sbjct:   61 YIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVIIWIVSCIIMIPQAIVMECSTVFPGLA---NKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLW---CRQIPGTSSVVQRKWKPLQPVSQPRGPGQPTK--SRMSAVAA---EIKQIRARRKTARMLMIVLLVFAICYLPISILNVLKRVFGMFAHTEDRETVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAFSC 381

The following BLAST results are available for this feature:

BLAST of TCONS_00014371-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014371-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OX2R	3.162e-32	27.41	Orexin receptor type 2 OS=Homo sapiens GN=HCRTR2 P...	[more]

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TCONS_00014371-protein (polypeptide) - C. hemisphaerica