TCONS_00014309-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014309-protein
Unique Name	TCONS_00014309-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	551

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014309-protein ID=TCONS_00014309-protein|Name=TCONS_00014309-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
MSTTDTLNVLSVRAAQEFEEVQERYKEYFNKCQQEETNRRRLEAQFKQLK
QVSLLAVAEYESLHKQYLSENQYRQHIEEKLRKVSDENQEIRKQNKLGSN
TTIVAQNNNNNGIQETKGELEVLRAMKDAVNNELRTAKNEITRLKEELVN
EQKSHGVTRNQSDLHQKQLKQLNRVSVLALNEFTDLKKKLEIEEANRKTA
EDVATEIVQQQKMNERKLSIIRETTEKDDQIKKFNDEIDKLNHTLTKERR
EYEDKIKELEEELEAIKDAENSKETEEKISLLMEQLDIAQRQAIEAEARA
EKSENDTRNLYVRLAQAERLIDSSQKMGAPPPPPPPPPPPPPLAAPVIRK
FISRIGKRKNKHEEQEEDPRIEAMTQMIDRIKKGVKLRSVNSPAKVSEED
GEEEEEGAMGELAGLLSNMRRGRRGTEDSIDNTIDEKPEPEFARLKLKKA
GSGANSRSVDDISNEATSELRKKLEKQKSVADGLIEENGENSKSNKEEEI
SNAVVTDNAGESKDSKVDQASALETTPPERSEPQSTTNDSHVTIYEVLDD
Q

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008004	XLOC_008004	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014309	TCONS_00014309	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..306
None	No IPR available	COILS	Coil	Coil	coord: 18..52
None	No IPR available	COILS	Coil	Coil	coord: 74..97
None	No IPR available	COILS	Coil	Coil	coord: 113..154
None	No IPR available	COILS	Coil	Coil	coord: 183..203
None	No IPR available	GENE3D	1.20.5.340		coord: 217..503 e-value: 0.011 score: 15.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..551
None	No IPR available	SUPERFAMILY	101447	Formin homology 2 domain (FH2 domain)	coord: 332..342

Blast

[Close]

BLAST of TCONS_00014309-protein vs. Swiss-Prot (Human)
Match: SHOT1 (Shootin-1 OS=Homo sapiens GN=SHTN1 PE=1 SV=4)

HSP 1 Score: 86.2705 bits (212), Expect = 1.082e-17
Identity = 119/374 (31.82%), Postives = 201/374 (53.74%), Query Frame = 0

Query:  113 IQETKGELEVLRAMKDAVNNELRTAKNEITRLKEELVNEQKSHGVTRNQSDLHQKQ-LKQLNRVSVLALNEFTDLKKKLEIEEANRKTAEDVATEIVQQQKMNERKLSIIRETTEKDDQIKKFNDEIDKLNHTLTKERREYEDKIKELEEELEAIKDAENSKETEEKISLLMEQLDIAQRQAIEAEARAEKSENDTRNLYVRLAQAERLIDSSQKMGAPPPPPPPPPPPPPLAAPVIRKFISRIGKRKN------KHE--------EQEEDPRIEAMTQMIDRIKKGVKLRSVNSPAKV-SEEDGEEEEEGAMGELAGLLSNMRRGRRGTEDSIDNTIDEKPEPEFAR-LKLKKAGSGANSRSVDDISNEATSE 469
            I+E + ++  ++  K  +  EL   K+++  + EE VN+ K      N   L Q++ L++ NRVS+LA+ E+ +++  LE+E+  RK AE  A E+  +Q   +R+  ++ +++  D Q+ K  DE  KL   L +ER +++ K+KELEE+LE       ++   ++I  L +QL++ +    E E + + SE   RNL   + + ++ ++ S+   + PPPPPPPPP PP     IR  +S I KR +      K E        E+  D + +A+ +M+DRIKKGV LR VN  A+  ++ +  +  E A+ EL G+L  + +    +  S+ +   E  E E  R L+ +K  + A+S S   I   ATSE
Sbjct:  144 IKELRDQIVSVQEEKKILAIELENLKSKLVEVIEE-VNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLE-------NETLHKEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSE--NSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKS--TSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGIL--ATSE 503

The following BLAST results are available for this feature:

BLAST of TCONS_00014309-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014309-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SHOT1	1.082e-17	31.82	Shootin-1 OS=Homo sapiens GN=SHTN1 PE=1 SV=4	[more]

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TCONS_00014309-protein (polypeptide) - C. hemisphaerica