TCONS_00014307-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014307-protein
Unique NameTCONS_00014307-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014307-protein ID=TCONS_00014307-protein|Name=TCONS_00014307-protein|organism=Clytia hemisphaerica|type=polypeptide|length=192bp
MAERQQGYGFTAEVSEKIAGKYDSNQEREAVAWIRSLVPDSGLDQSEYGA
EALAEKLNDGTILCKLANALESRAVPKMNTSKMAFKKMENINFFLEFSYR
FGCNKTDMFQTVDLYEATNMAQVVNGLHALGRKANAKGKSGIGPKESNKN
ERNFSEEQIRQGRDAQIGLQAGTNKFANQSGQNFGKTRAIID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008003XLOC_008003Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014307TCONS_00014307Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
IPR000557Calponin_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 154..167
score: 28.57
coord: 168..183
score: 61.03
coord: 3..17
score: 38.43
coord: 86..102
score: 33.91
coord: 22..35
score: 42.44
coord: 102..117
score: 52.21
coord: 53..68
score: 47.43
coord: 123..137
score: 41.96
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 26..130
e-value: 3.6E-16
score: 69.7
IPR001715Calponin homology domainPFAMPF00307CHcoord: 25..134
e-value: 3.1E-19
score: 69.0
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 21..176
e-value: 4.7E-32
score: 110.4
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 24..134
score: 15.394
IPR001715Calponin homology domainCDDcd00014CHcoord: 25..135
e-value: 6.69045E-19
score: 77.3511
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 17..176
IPR000557Calponin repeatPFAMPF00402Calponincoord: 167..190
e-value: 1.4E-10
score: 40.5
IPR000557Calponin repeatPROSITEPS01052CALPONIN_1coord: 167..185
IPR000557Calponin repeatPROSITEPS51122CALPONIN_2coord: 167..191
score: 11.405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..160

Blast
[Close]
BLAST of TCONS_00014307-protein vs. Swiss-Prot (Human)
Match: TAGL3 (Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 7.013e-42
Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 0 
Query:    1 MAERQQGYGFTAEVSEKIAGKYDSNQEREAVAWIRSLVPDSGLDQSEYGAEALAEKLNDGTILCKLANALES---RAVPKMNTSKMAFKKMENINFFLEFSYRFGCNKTDMFQTVDLYEATNMAQVVNGLHALGRKANAK------GKSGIGPKESNKNERNFSEEQIRQGRDAQIGLQAGTNKFANQSGQN-FGKTRAII 191
            MA R   YG + EV EKI  KYD++ E + V WI  L     ++    G     + L DGT+LCKL N+L       +PK++ SKMAFK+ME I+ FL+ +  +G   TD+FQTVDL+E  +MA V   L ALG  A  K      G+     +++ +N R FSEEQ+RQG++  IGLQ G+NK A+Q+G   +G  R I+
Sbjct:    1 MANRGPSYGLSREVQEKIEQKYDADLENKLVDWI-ILQCAEDIEHPPPGRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGKDMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNV-IGLQMGSNKGASQAGMTGYGMPRQIM 199
The following BLAST results are available for this feature:
BLAST of TCONS_00014307-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAGL37.013e-4242.29Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2[more]
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