TCONS_00014300-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014300-protein
Unique Name	TCONS_00014300-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	444

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014300-protein ID=TCONS_00014300-protein|Name=TCONS_00014300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MKSIYVIFLILYLDLIAFTIILPLFPSIIEFYDNKDQTSTTKDGSLRQIH
DCMEWFKTTLGMPDRRRYNNVLVGGILGSIFSLLQFICSPTIGFLSDVIG
RKKVLVFSMLGTLTSYFIWWKSETFTLFLVSRIVGGLLKGSVTIATTMMS
DVTNKENRGKGMAFIGLGFSLGFITGPMIGAYFVSKAKVDTLTHAFALPA
QVAMMIQLIALLATVFLLDETIGEKKEFNVKALISKIWSYTNPISLLWGG
KSSGKSSKTLHQFTIINFIYLLIFSGLEFTLTFVTHERFNFTSMQQGKLF
LFAGIIMMLVQGGYVRRMKHKNEKKIAIQGMLAMIPAMITIAFASTVRYT
YIALALYSFGAGTVVPCLTALFSQHSENINSGENIGIFRSAGALARAIAP
FVTCTLYWSLGSVSCYLIGAGLFILPLFLLSRVSVESEEEKKSK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007999	XLOC_007999	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014300	TCONS_00014300	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 256..444 e-value: 8.2E-17 score: 60.6
None	No IPR available	GENE3D	1.20.1250.20		coord: 4..220 e-value: 8.0E-28 score: 96.9
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 7..400 e-value: 8.7E-46 score: 156.4
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 92..108
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 3..438 score: 22.373
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 75..433 e-value: 1.2712E-23 score: 98.9252
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 4..38 coord: 74..435

Blast

[Close]

BLAST of TCONS_00014300-protein vs. Swiss-Prot (Human)
Match: MFS10 (Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.576e-80
Identity = 141/381 (37.01%), Postives = 222/381 (58.27%), Query Frame = 0

Query:   53 MEWFKTTLGMPDRRRYNNVLVGGILGSIFSLLQFICSPTIGFLSDVIGRKKVLVFSMLGTLTSYFIWWKSETFTLFLVSRIVGGLLKGSVTIATTMMSDVTNKENRGKGMAFIGLGFSLGFITGPMIGAYFVSKAKVDTLTHAFALPAQVAMMIQLI----ALLATVFLLDETIG-EKKEFNVKALISKIWSYTNPISLL-------WGGKSSGKSSKTLHQFTIINFIYLLIFSGLEFTLTFVTHERFNFTSMQQGKLFLFAGIIMMLVQGGYVRRMKHKNEKKIAIQGMLAMIPAMITIAFASTVRYTYIALALYSFGAGTVVPCLTALFSQHSENINSGENIGIFRSAGALARAIAPFVTCTLYWSLGSVSCYLIGAG 421
            ++WF T +GMP  +RYN+VL GG++GS FS+LQF+C+P  G  SD +GR+ V++  ++G  TSY +W  S +F  FL SR++GG+ KG+V+++T +++D+ +   R +GMA IG+ FSLGF  GPM+GA               +LP ++A    L+     LL     L ET+  EK+  ++           +P++LL            SG    +L +  ++ F+YL +FSGLE+TL+F+TH+RF F+S+QQGK+F   G+ M  +QG Y RR+    E     + +L ++PA + I +  ++    + L LYSF A  VVPCL+++ + +      G  +G  RS GALARA  P V  ++YW  G+ +C+   +G
Sbjct:   68 VDWFATAIGMPVEKRYNSVLFGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSRSFAAFLASRLIGGISKGNVSLSTAIVADLGSPLARSQGMAVIGVAFSLGFTLGPMLGA---------------SLPLEMAPWFALLFAASDLLFIFCFLPETLPLEKRAPSIALGFRDAADLLSPLALLRFSAVARGQDPPSGDRLSSLRRLGLVYFLYLFLFSGLEYTLSFLTHQRFQFSSLQQGKMFFLIGLTMATIQGAYARRIHPGGEVAAVKRALLLLVPAFLLIGWGRSLPVLGLGLLLYSFAAAVVVPCLSSVVAGYGSPGQKGTVMGTLRSLGALARAAGPLVAASVYWLAGAQACFTTWSG 433

The following BLAST results are available for this feature:

BLAST of TCONS_00014300-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014300-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFS10	1.576e-80	37.01	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00014300-protein (polypeptide) - C. hemisphaerica