TCONS_00014193-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014193-protein
Unique Name	TCONS_00014193-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	907

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014193-protein ID=TCONS_00014193-protein|Name=TCONS_00014193-protein|organism=Clytia hemisphaerica|type=polypeptide|length=907bp
MGMSSKGKKIAKDGIVVDDMDLKKEVTIEEQKQCITRSHFKDDRGPESYF
PTKNRTPKNSKIGKHLAEVFRTDFITAMKVPDSQPLPAGKTITLKDTWRQ
EWEKGVQVPVHPEKILKAVVRNSGIELPQVNSENIFKMPEKFFKFSEENY
VKAGRESLSSCNYDLDDIDMGWLKSTETMRTLKKSPSIDALTMERAITWF
ERECFSKMAHAVATKEGLSIEYDESTQCNVCLSPDAEDGNEIIFCDVCNM
CVHQHCYGVLEIPEGNWLCNPCSRGVLDPPCCLCPAKGGAMKRIKDSYEW
IHVICAWWVPEVKIEDVKFIERIRKDKIPASRWNLLCCICREKDGACIQC
SVKRCVKAYHVTCAVKEGLEMKTVVVPEKDDVQHISFCSKHCVPVPLEHN
PHRTKCGEEVENNRIKELRKLESEFYSLVSVSKASRELKLAKEVTRRLLS
YWTMKRRENDNAPLIALTLEQQEKLSGKQGVVLLNQQKTLEMERFLHLRQ
DLERLRNLCYMIVRREKVRKEIQRTSMEVFYKQNDMLLDENEDWSGGDKL
EFLTQRSTQFNDFSENYVNEKLWKEENGRTDTMFDSTIEEDDELLDTSII
EKFNEKDLERDKPVPRSNQSSRRSSRASSPKINGMIRTVKLDHATASTQR
NIFEFFKKENKSFDTQDNNVKIKNEKLKSEKDQVAISPEECTEGSSTAVK
RLDFEKDELGGNEIEKKEISRETFNAIFLTDDESDCEDAGRMTKIKTEIN
VNDEKPADEKTLLKTHDECPTDETSPLINSLDNTKESSTNENNKSDNRPI
SNGLDPKDKLLTANSGQPLDLYIDTTSQGNDNVFKPSSLARKGKKRFRNL
PPIAEPQRRNSPRLNNKTIEDTFAEQSEFTGHAASITKLKCLVNGSKKRR
RLNXQPL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007945	XLOC_007945	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014193	TCONS_00014193	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001965	Znf_PHD
IPR013083	Znf_RING/FYVE/PHD
IPR019786	Zinc_finger_PHD-type_CS
IPR019787	Znf_PHD-finger
IPR034732	EPHD
IPR011011	Znf_FYVE_PHD

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 336..392 e-value: 2.6E-4 score: 30.3 coord: 227..273 e-value: 5.5E-7 score: 39.2
None	No IPR available	PFAM	PF13832	zf-HC5HC2H_2	coord: 280..391 e-value: 4.9E-31 score: 107.0
None	No IPR available	PFAM	PF13831	PHD_2	coord: 240..272 e-value: 2.5E-11 score: 42.8
None	No IPR available	CDD	cd15492	PHD_BRPF_JADE_like	coord: 227..272 e-value: 1.59638E-24 score: 97.3054
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 328..543 e-value: 5.4E-6 score: 25.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 211..276 e-value: 2.0E-11 score: 43.0
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 228..272
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 225..275 score: 9.472
IPR034732	Extended PHD (ePHD) domain	PROSITE	PS51805	EPHD	coord: 278..392 score: 26.991
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 217..286

Blast

[Close]

BLAST of TCONS_00014193-protein vs. Swiss-Prot (Human)
Match: JADE1 (Protein Jade-1 OS=Homo sapiens GN=JADE1 PE=1 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 3.472e-129
Identity = 226/514 (43.97%), Postives = 301/514 (58.56%), Query Frame = 0

Query:   67 AEVFRTDFITAMKVPDSQPLPAGKTITLKDTWRQEWEKGVQVPVHPEKILKAVVRNSGIELPQVNSEN---IFKMPEKFFKFS-----EENYVKAGRESLSSCNYDLDDIDMGWLKSTETMRTLKKSPSIDALTMERAITWFERECFSKMAHAVATKEGLSIEYDESTQCNVCLSPDAEDGNEIIFCDVCNMCVHQHCYGVLEIPEGNWLCNPCSRGVLDPPCCLCPAKGGAMKRIKDSYEWIHVICAWWVPEVKIEDVKFIERIRK-DKIPASRWNLLCCICREKDGACIQCSVKRCVKAYHVTCAVKEGLEMKTVVVPEKDDVQHISFCSKH----------------------CVPV-PLEHNPHRTKCGEEVE--NNRIKELRKLESEFYSLVSVSKASRELKLAKEVTRRLLSYWTMKRRENDNAPLIALTLEQQEKLSGKQGVVLLNQQKTLEMERFLHLRQDLERLRNLCYMIVRREKVRKEIQRTSMEVFYKQNDMLLDENEDWSG 546
            +EVFRTD ITAMK+ DS  L   +   L D WRQEWEKGVQVPV P  I + V R        V SE    +F  P+K+   S     E  YV     + S C YDL+D+D  WL+ T         P +D  TMER +  FE+ C+  M HA+ T+EGL IEYDE   C+VC SPD EDGNE++FCD CN+CVHQ CYG+L++PEG+WLC  C+ GV  P C LCP KGGAMK  +   +W+HV CA W+PEV I   + +E I K   IP+SRW L+C +C EK GA IQCSVK C  A+HVTCA   GLEMKT++  E D+V+  S+C KH                      C P  PLE      +  EE    + R ++L++LE EFY+ V++   +R L+L +EV   L  YW +KR+ N N PLI    ++++ L+ ++  VL  +     ++ F HLRQDLER+RNL YM+ RREK+++ + +   ++F     +L  E E  SG
Sbjct:   45 SEVFRTDLITAMKLHDSYQLNPDEYYVLADPWRQEWEKGVQVPVSPGTIPQPVAR--------VVSEEKSLMFIRPKKYIVSSGSEPPELGYVDIRTLADSVCRYDLNDMDAAWLELTNEEFKEMGMPELDEYTMERVLEEFEQRCYDNMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGV-QPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVKNCRTAFHVTCAFDRGLEMKTILA-ENDEVKFKSYCPKHSSHRKPEESLGKGAAQENGAPECSPRNPLEPFASLEQNREEAHRVSVRKQKLQQLEDEFYTFVNLLDVARALRLPEEVVDFLYQYWKLKRKVNFNKPLITPKKDEEDNLAKREQDVLFRR-----LQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNLYTKLL--EQERVSG 541

The following BLAST results are available for this feature:

BLAST of TCONS_00014193-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014193-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
JADE1	3.472e-129	43.97	Protein Jade-1 OS=Homo sapiens GN=JADE1 PE=1 SV=1	[more]

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TCONS_00014193-protein (polypeptide) - C. hemisphaerica