piwi (polypeptide) - C. hemisphaerica

Overview


Name	piwi
Unique Name	TCONS_00014147-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	675

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014147-protein ID=TCONS_00014147-protein|Name=piwi|organism=Clytia hemisphaerica|type=polypeptide|length=675bp
MTGRARGRARGRGRAQQNAPPPGGAPPPQQSAPQAVGRGRARGGPPPAQS
APQQQAPAPRQPPPQQQRQQAPVAAVADQMQKMNVQEERPRQRRGIGEFK
TRSFKDPATDKKGTSGEPVQILTNYFKVDKMPRFEGLHQYVVAFDPDIQS
QKLKGFLLFSMQDVIGEVKVFDGMSLFLPRKLAEPVVERCVETRDGSSIK
VKITHTNEVPVNSPQVVQLMGILFRRQLRHLNMQLVGRHYFNPSRKIDVP
AHKMVVWPGFETNIXLNGRKLPTQPMYQRDQKFTYQPGNADWQKETRGKL
LISTFNMQKWVLIFSQRDEKVAQDFLRTLKTVASPMGMRVADPQLCRLQS
DQPRQYIQSLKEQIKPDTEIVVCIVPNNRKDRYDAIKKITCVENPVPSQV
VVSRTLSKQQMLMSVCTKIAIQLNCKLGGEVWATEIPVKKLMVIGFDVYH
DSMNKGQSIGGFIASTNDSLTRYYSRITKQRSHNEICSQLKICMTGALKK
YREVNGHDPDRIIVYRDGVGDGQIYDVKDHEVPQFKAAIQEFNPNITKFS
MIIVKKRVSTRLFAHSRGGISNPMPGTIVDSAVTRPEFYDFFLCSQTVRQ
GTVTPVNYNIIEDSSGLKPDHLQKLTYKLCHLYYNWPGTIKVPAPCQYAH
KLAFLVGQSVHTDPALELSDRLYYL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007915	XLOC_007915	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014147	TCONS_00014147	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003165	Piwi
IPR012337	RNaseH-like_dom
IPR003100	PAZ_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003165	Piwi domain	SMART	SM00950	Piwi_a_2	coord: 370..661 e-value: 7.4E-119 score: 410.8
IPR003165	Piwi domain	PFAM	PF02171	Piwi	coord: 370..661 e-value: 2.5E-99 score: 332.2
IPR003165	Piwi domain	PROSITE	PS50822	PIWI	coord: 370..661 score: 50.228
None	No IPR available	GENE3D	3.40.50.2300		coord: 269..434 e-value: 6.6E-38 score: 129.6
None	No IPR available	CDD	cd04658	Piwi_piwi-like_Euk	coord: 264..658 e-value: 0.0 score: 544.938
IPR012337	Ribonuclease H-like domain	GENE3D	3.30.420.10		coord: 435..670 e-value: 4.1E-83 score: 278.0
IPR012337	Ribonuclease H-like domain	SUPERFAMILY	53098	Ribonuclease H-like	coord: 267..675
IPR003100	PAZ domain	SUPERFAMILY	101690	PAZ domain	coord: 120..266

Blast

[Close]

BLAST of piwi vs. Swiss-Prot (Human)
Match: PIWL1 (Piwi-like protein 1 OS=Homo sapiens GN=PIWIL1 PE=1 SV=1)

HSP 1 Score: 465.307 bits (1196), Expect = 1.736e-153
Identity = 215/421 (51.07%), Postives = 303/421 (71.97%), Query Frame = 0

Query:  260 FETNI-XLNGRKLPTQPMYQRDQKFTYQPGNADWQKETRGKLLISTFNMQKWVLIFSQRDEKVAQDFLRTLKTVASPMGMRVADPQLCRLQSDQPRQYIQSLKEQIKPDTEIVVCIVPNNRKDRYDAIKKITCVENPVPSQVVVSRTLSKQQMLMSVCTKIAIQLNCKLGGEVWATEIPVKKLMVIGFDVYHDSMNKGQSIGGFIASTNDSLTRYYSRITKQRSHNEICSQLKICMTGALKKYREVNGHDPDRIIVYRDGVGDGQIYDVKDHEVPQF----KAAIQEFNPNITKFSMIIVKKRVSTRLFAHSRGGISNPMPGTIVDSAVTRPEFYDFFLCSQTVRQGTVTPVNYNIIEDSSGLKPDHLQKLTYKLCHLYYNWPGTIKVPAPCQYAHKLAFLVGQSVHTDPALELSDRLYYL 675
            F++N+   +GR L T+ ++Q  + F Y P  ADW KETRG  LIS   +  W+LI+++R+ + A   ++ L  V   MGM++    +  +  D+   Y++ L++++  DT+IVVC++ +NRKD+YDAIKK  C + P PSQ VV+RTL KQQ +M++ TKIA+Q+NCK+GGE+W  +IP+K +M++G D YHD     +SI GF+AS N+ +TR++SR   Q    E+   LK+C+  AL+ +   N + P RIIVYRDGVGDGQ+  + ++EVPQF    K+  + +NP +T   +I+VKKRV+TR FA S G + NP+PGT++D  VTRPE+YDFF+ SQ VR G+V+P +YN+I D+SGLKPDH+Q+LTYKLCH+YYNWPG I+VPAPCQYAHKLAFLVGQS+H +P L LS+RLYYL
Sbjct:  445 FDSNLLSFSGRILQTEKIHQGGKTFDYNPQFADWSKETRGAPLISVKPLDNWLLIYTRRNYEAANSLIQNLFKVTPAMGMQMRKAIMIEV-DDRTEAYLRVLQQKVTADTQIVVCLLSSNRKDKYDAIKKYLCTDCPTPSQCVVARTLGKQQTVMAIATKIALQMNCKMGGELWRVDIPLKLVMIVGIDCYHDMTAGRRSIAGFVASINEGMTRWFSRCIFQDRGQELVDGLKVCLQAALRAWNSCNEYMPSRIIVYRDGVGDGQLKTLVNYEVPQFLDCLKSIGRGYNPRLT---VIVVKKRVNTRFFAQSGGRLQNPLPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSPTHYNVIYDNSGLKPDHIQRLTYKLCHIYYNWPGVIRVPAPCQYAHKLAFLVGQSIHREPNLSLSNRLYYL 861

HSP 2 Score: 153.295 bits (386), Expect = 9.754e-39
Identity = 81/241 (33.61%), Postives = 137/241 (56.85%), Query Frame = 0

Query:   26 PPPQQSAPQAVGRGRARGGPPPAQSAPQQQAPAPRQPPPQQQRQQAPVAAVADQMQKMNVQEERPRQR--RGIGEFKTRSFKDPATDKKGTSGEPVQILTNYFKVDKMPRFEGLHQYVVAFDPDIQSQKLKGFLLFSMQDVIGEVKVFDGMSLFLPRKLAEPVVERCVETRDGSSIKVKITHTNEVPVNSPQVVQLMGILFRRQLRHLNMQLVGRHYFNPSRKIDVPAHKMVVWPGFETNI 264
            PPP +   +  GRGR RG       +   Q  A                      Q++++ E   R+R    +G    ++       K G+SG  V++ TN+F++   P++  L+QY + ++P +++++L+  LLF  +D+IG+   FDG  LFLP++L + V E   +TR+G  +++ IT TNE+P  SP  +Q   I+FRR L+ +N+Q +GR+Y+NP+  ID+P+H++V+WPGF T+I
Sbjct:   39 PPPAEG--ELFGRGRQRGTAGGTAKSQGLQISAG--------------------FQELSLAERGGRRRDFHDLGVNTRQNLDHVKESKTGSSGIIVRLSTNHFRLTSRPQW-ALYQYHIDYNPLMEARRLRSALLFQHEDLIGKCHAFDGTILFLPKRLQQKVTEVFSKTRNGEDVRITITLTNELPPTSPTCLQFYNIIFRRLLKIMNLQQIGRNYYNPNDPIDIPSHRLVIWPGFTTSI 256

The following BLAST results are available for this feature:

BLAST of piwi vs. Swiss-Prot (Human)

BLAST of piwi vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PIWL1	1.736e-153	51.07	Piwi-like protein 1 OS=Homo sapiens GN=PIWIL1 PE=1...	[more]

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piwi (polypeptide) - C. hemisphaerica