TCONS_00014050-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014050-protein
Unique NameTCONS_00014050-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length840

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014050-protein ID=TCONS_00014050-protein|Name=TCONS_00014050-protein|organism=Clytia hemisphaerica|type=polypeptide|length=840bp
MFLADQNKEVDQPDSTIDSENSSNDNTNSKKEDEILNPFNCDKEADQPDS
TIDSENSSNDNTNSKKEDEILNPFHCDKEADDCIDIRTKDGETVLVSYPM
LVYMSDKFENLIKGDADTEQTGKRRFIVAIEFTTECIIKSISFHFPRFDS
CQSKFSDPNYLRQLLTICREWSLTVFKKDLECHIMKVLKPILEFKNLTAG
QLTLLQLADKFELADVVNTVLSNVKGVSFKYTDVPGSEFEKLGKDVKYEI
LKMVCMAMEERPTLFTPGKSTNQSLKFKPKKDLEHMTKSGISIMVETRAQ
CIVSMPEYKGKTVEEIRLEDYTCTKDDPTAKTTEPSVTELKSIFNFLDFI
VYEDRVVDLCPKNKFKSSSRNDYTDDSSVIKNFSTRRTPADVKLVMSDGE
LFINPYILTSNSPVFEKMLSDVKKSVDEDASVLTMQWKSVKEIGMILKYL
TTRQSITDDMNLETLASLCQEYRIDWLLKKIEEFIEEKTVSFSPISTEKL
LKYLKIASIYGFEKAMEKIVQKVDKSFITLQMYEEFTWLNTSVKILLARK
RLWEILPKDERDIIMNTNEITMLSVLADFKQEKFSFEKPFDNSASLSNRT
TPLEIKKSKSKKKSKTGNFRATTSSSGGEMFGATTSGSGSGLFGASTSGS
GGGLFGTTTSSSGGGLFGTSTSSSGGGLFGATTSGSGGGLFGTTTSGSGG
GLFGTTTTTSSGGGLFGTTRTSSGSGLFGASTSGSGGGLFGATTSGSGGG
LFGTSTSSSGVGLFGTKTTGSVGGMFGTTTTSSGGGLFGAKTPGSGGGLF
GTSTSSSGGGLFTTTTTSSGGGLFVAKTSSSGGGLFGSST
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007860XLOC_007860Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014050TCONS_00014050Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR025574Nucleoporin_FG_rpt
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 390..489
e-value: 7.0E-7
score: 38.9
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 387..488
e-value: 1.4E-7
score: 31.6
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 390..459
score: 10.592
NoneNo IPR availableGENE3D3.30.710.10coord: 374..519
e-value: 1.0E-10
score: 41.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70
IPR025574Nucleoporin FG repeatPFAMPF13634Nucleoporin_FGcoord: 641..717
e-value: 3.2E-5
score: 24.6
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 377..487

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014050-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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